Evidence map›Paper›PMID 28718764›Full record

ArticleeLife2017

CRISPR-mediated genetic interaction profiling identifies RNA binding proteins controlling metazoan fitness.

Adam D Norris, Xicotencatl Gracida, John A Calarco

Abstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Conserved role for spliceosomal component PRPF40A in microexon splicing.bioRxiv : the preprint server for biology · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Adam D NorrisFAS Center for Systems Biology, Harvard University, Cambridge, United States.ORCID 0000-0002-0570-7414
Xicotencatl GracidaFAS Center for Systems Biology, Harvard University, Cambridge, United States.
John A CalarcoFAS Center for Systems Biology, Harvard University, Cambridge, United States.ORCID 0000-0002-2197-7801

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Investigating the Role of Alternative Splicing Regulatory Networks in Nervous SysDP5OD009153 · OD · HARVARD UNIVERSITY · PI CALARCO, JOHN ANTHONY · 2011 to 2015
$2.1M
NIH HHS DP5 OD009153NIH HHS P40 OD010440
6 · The paper itself

Abstract

Genetic interaction screens have aided our understanding of complex genetic traits, diseases, and biological pathways. However, approaches for synthetic genetic analysis with null-alleles in metazoans have not been feasible. Here, we present a CRISPR/Cas9-based Synthetic Genetic Interaction (CRISPR-SGI) approach enabling systematic double-mutant generation. Applying this technique in

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsMutationRNA InterferenceAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsEpistasis, GeneticHigh-Throughput Screening AssaysPhenotypeRNA-Binding ProteinsCaenorhabditis elegans ProteinsEXC-7 protein, C elegansmbl-1 protein, C elegansRNA-Binding ProteinsC. eleganschromosomesevolutionary biologygenesgenomicslifespan and fitnessRNA binding proteinsRNA processingsynthetic genetic interactions

Identifiers

PMID28718764
PMCPMC5544425

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.