Evidence map›Paper›PMID 28718046›Full record

ArticleVirus genes2017

Complete genome sequencing and characterization revealed a recombinant subgroup B isolate of avian leukosis virus with a subgroup J-like U3 region.

Peikun Wang, Yongli Yang, Lulu Lin, Haijuan Li, Ping Wei

Abstract read
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In one paragraph

Article in Virus genes, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Peikun WangInstitute for Poultry Science and Health, Guangxi University, Nanning, 530004, Guangxi, China.
Yongli YangInstitute for Poultry Science and Health, Guangxi University, Nanning, 530004, Guangxi, China.
Lulu LinInstitute for Poultry Science and Health, Guangxi University, Nanning, 530004, Guangxi, China.
Haijuan LiInstitute for Poultry Science and Health, Guangxi University, Nanning, 530004, Guangxi, China.
Ping WeiInstitute for Poultry Science and Health, Guangxi University, Nanning, 530004, Guangxi, China. pingwei8@126.com.
Guangxi University · CN

Funding

Guangxi Program for Modern Agricultural Industry Technical System Construction-Chicken Industry nycytxgxcxtd-04-20-2National Eradication Program for AL 201203055
6 · The paper itself

Abstract

One natural recombinant subgroup B avian leukosis virus (ALV) with a subgroup J-like U3 region was isolated from commercial native chickens that experienced disease in 2014 and named GX14FF03. GX14FF03 was isolated by DF-1 cell culture and then identified with ELISA detection of avian leukosis virus p27 group-specific antigen, the detection of subtype specific PCR, and indirect immunofluorescence assay with ALV-B-specific monoclonal antibody. Its complete proviral genome was sequenced and compared with the reference strains of ALVs and found that the gag and pol were relatively conservative. The gp85 of GX14FF03 showed 91.3-96.2% amino acid identity to the other ALV-B reference strains and 36.0-37.1% identity to the ALV-J reference strains, and its U3 region showed 49.4-89.3% nucleotide identity to ALV-A, B, C, D, E, K reference strains and 91.6-95.3% identity to ALV-J reference strains. Phylogenetic analysis of U3 region showed that GX14FF03 and ALV-J reference strains were in the same cluster. Moreover, an additional AIB REP1 retroviral transcription regulatory element was found in GX14FF04 U3 region which was only presenting in ALV-J strains. These results suggested that isolate GX14FF03 may be a recombinant ALV-B with the ALV-J-like U3 region.

Indexed as

AnimalsAvian LeukosisAvian Leukosis VirusBase SequenceChickensPhylogenyPoultry DiseasesProvirusesRecombination, GeneticViral Envelope ProteinsWhole Genome SequencingViral Envelope ProteinsAIB PER1Complete genome sequenceRecombinantSubgroup B avian leukosis virusU3 region

Identifiers

PMID28718046
OpenAlexW2734467835

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.