Evidence map›Paper›PMID 28716908›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Sequential eviction of crowded nucleoprotein complexes by the exonuclease RecBCD molecular motor.

Tsuyoshi Terakawa, Sy Redding, Timothy D Silverstein, Eric C Greene

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. RecBCD enzyme: mechanistic insights from mutants of a complex helicase-nuclease.Microbiology and molecular biology reviews : MMBR · 2023
    Review
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Tsuyoshi TerakawaDepartment of Biochemistry & Molecular Biophysics, Columbia University, New York, NY 10032.
Sy ReddingDepartment of Biochemistry & Molecular Biophysics, Columbia University, New York, NY 10032.
Timothy D SilversteinDepartment of Biochemistry & Molecular Biophysics, Columbia University, New York, NY 10032.
Eric C GreeneDepartment of Biochemistry & Molecular Biophysics, Columbia University, New York, NY 10032 ecg2108@cumc.columbia.edu.
Columbia University · US

Funding

Protein purification instrumentation in support of single molecule studies of genome integrityR35GM118026 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GREENE, ERIC C · 2016 to 2025
$5.7M
Using nanofabricated DNA curtains to reveal protein during replicationF32GM101819 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SILVERSTEIN, TIMOTHY DAVID · 2012 to 2013
$88k
NIGMS NIH HHS F32 GM101819NIGMS NIH HHS R35 GM118026
6 · The paper itself

Abstract

In physiological settings, all nucleic acids motor proteins must travel along substrates that are crowded with other proteins. However, the physical basis for how motor proteins behave in these highly crowded environments remains unknown. Here, we use real-time single-molecule imaging to determine how the ATP-dependent translocase RecBCD travels along DNA occupied by tandem arrays of high-affinity DNA binding proteins. We show that RecBCD forces each protein into its nearest adjacent neighbor, causing rapid disruption of the protein-nucleic acid interaction. This mechanism is not the same way that RecBCD disrupts isolated nucleoprotein complexes on otherwise naked DNA. Instead, molecular crowding itself completely alters the mechanism by which RecBCD removes tightly bound protein obstacles from DNA.

Indexed as

Adenosine TriphosphateDNADNA-Binding ProteinsDNA ReplicationEscherichia coliEscherichia coli ProteinsExodeoxyribonuclease VMicroscopy, FluorescenceMonte Carlo MethodNucleoproteinsAdenosine TriphosphateDNADNA-Binding ProteinsEscherichia coli ProteinsExodeoxyribonuclease Vexodeoxyribonuclease V, E coliNucleoproteinsDNA curtainmolecular crowdingmolecular motorRecBCDsingle molecule

Identifiers

PMID28716908
PMCPMC5547600
OpenAlexW2734884645

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.