Evidence map›Paper›PMID 28716094›Full record

ArticleMalaria journal2017

An analytical approach to reduce between-plate variation in multiplex assays that measure antibodies to Plasmodium falciparum antigens.

Rui Fang, Andrew Wey, Naveen K Bobbili, Rose F G Leke, Diane Wallace Taylor, John J Chen

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

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  4. Seroprevalence and Parasite Rates ofThe American journal of tropical medicine and hygiene · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Rui FangOffice of Biostatistics and Quantitative Health Sciences, University of Hawaii John A. Burns School of Medicine, Honolulu, HI, 96813, USA.
Andrew WeyOffice of Biostatistics and Quantitative Health Sciences, University of Hawaii John A. Burns School of Medicine, Honolulu, HI, 96813, USA.
Naveen K BobbiliDepartment of Tropical Medicine, Medical Microbiology and Pharmacology, University of Hawaii John A. Burns School of Medicine, 651 Ilalo Street, BSB 211, Honolulu, HI, 96813, USA.
Rose F G LekeBiotechnology Center, Faculty of Medicine and Biomedical Research, University of Yaounde 1, Yaounde, Cameroon.
Diane Wallace TaylorDepartment of Tropical Medicine, Medical Microbiology and Pharmacology, University of Hawaii John A. Burns School of Medicine, 651 Ilalo Street, BSB 211, Honolulu, HI, 96813, USA.
John J ChenOffice of Biostatistics and Quantitative Health Sciences, University of Hawaii John A. Burns School of Medicine, Honolulu, HI, 96813, USA. jjchen@hawaii.edu.ORCID 0000-0003-0170-0407
University of Hawaiʻi at Mānoa · USUniversité de Yaoundé I · CM

Funding

UH Hilo COP A&RP20GM103466 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI Peter R Hoffmann · 2012 to 2026
$60.3M
RESEARCH DESIGN AND BIOSTATISTICS COREU54MD007584 · NIMHD · UNIVERSITY OF HAWAII AT MANOA · PI HEDGES, JERRIS ROBERT, MOKUAU, NOREEN · 2012 to 2018
$21.1M
Defining Immunity to Placental Malaria using a Multi-assay Predictive ModelR21AI105286 · NIAID · UNIVERSITY OF HAWAII AT MANOA · PI CHEN, JOHN J, TAYLOR, DIANE WALLACE · 2014 to 2015
$418k
NIAID NIH HHS R21 AI105286NIGMS NIH HHS P20 GM103466NIMHD NIH HHS U54 MD007584
6 · The paper itself

Abstract

backgroundAntibodies play an important role in immunity to malaria. Recent studies show that antibodies to multiple antigens, as well as, the overall breadth of the response are associated with protection from malaria. Yet, the variability and reliability of antibody measurements against a combination of malarial antigens using multiplex assays have not been well characterized.

methodsA normalization procedure for reducing between-plate variation using replicates of pooled positive and negative controls was investigated. Sixty test samples (30 from malaria-positive and 30 malaria-negative individuals), together with five pooled positive-controls and two pooled negative-controls, were screened for antibody levels to 9 malarial antigens, including merozoite antigens (AMA1, EBA175, MSP1, MSP2, MSP3, MSP11, Pf41), sporozoite CSP, and pregnancy-associated VAR2CSA. The antibody levels were measured in triplicate on each of 3 plates, and the experiments were replicated on two different days by the same technician. The performance of the proposed normalization procedure was evaluated with the pooled controls for the test samples on both the linear and natural-log scales.

resultsCompared with data on the linear scale, the natural-log transformed data were less skewed and reduced the mean-variance relationship. The proposed normalization procedure using pooled controls on the natural-log scale significantly reduced between-plate variation.

conclusionsFor malaria-related research that measure antibodies to multiple antigens with multiplex assays, the natural-log transformation is recommended for data analysis and use of the normalization procedure with multiple pooled controls can improve the precision of antibody measurements.

Indexed as

Antibodies, ProtozoanHumansPlasmodium falciparumReproducibility of ResultsAntibodies, ProtozoanAntibodiesBetween-plate variationMalariaMultiplex assayNormalization procedurePlacental malaria

Identifiers

PMID28716094
PMCPMC5513105
OpenAlexW2735198034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.