Evidence map›Paper›PMID 28716091›Full record

ArticleBMC plant biology2017

Suppression of the phytoene synthase gene (EgcrtB) alters carotenoid content and intracellular structure of Euglena gracilis.

Shota Kato, Mika Soshino, Shinichi Takaichi, Takahiro Ishikawa, Noriko Nagata, Masashi Asahina, Tomoko Shinomura

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 45 citations in OpenAlex.

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  11. Metabolic network reconstruction ofFrontiers in microbiology · 2023
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  15. The Cell Division Cycle ofPlants (Basel, Switzerland) · 2021
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  16. Review
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  18. Article
  19. Article
  20. Exploring the MicroalgaMarine drugs · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Shota KatoDepartment of Biosciences, School of Science and Engineering, Teikyo University, 1-1 Toyosatodai, Utsunomiya, Tochigi, 320-8551, Japan.
Mika SoshinoPlant Molecular and Cellular Biology Laboratory, Graduate School of Science and Engineering, Teikyo University, 1-1 Toyosatodai, Utsunomiya, Tochigi, 320-8551, Japan.
Shinichi TakaichiDepartment of Biology, Nippon Medical School, 1-7-1 Kyonan-cho, Musashino, Tokyo, 180-0023, Japan.
Takahiro IshikawaDepartment of Life Science and Biotechnology, Faculty of Life and Environmental Science, Shimane University, 1060 Nishikawatsu, Matsue, Shimane, 690-8504, Japan.
Noriko NagataFaculty of Science, Japan Women's University, Bunkyo-ku, Tokyo, 112-8681, Japan.
Masashi AsahinaDepartment of Biosciences, School of Science and Engineering, Teikyo University, 1-1 Toyosatodai, Utsunomiya, Tochigi, 320-8551, Japan.
Tomoko ShinomuraDepartment of Biosciences, School of Science and Engineering, Teikyo University, 1-1 Toyosatodai, Utsunomiya, Tochigi, 320-8551, Japan. shinomura@nasu.bio.teikyo-u.ac.jp.ORCID 0000-0002-2718-2188
Teikyo University · JPJapan Women's University · JPShimane University · JPTokyo University of Agriculture · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPhotosynthetic organisms utilize carotenoids for photoprotection as well as light harvesting. Our previous study revealed that high-intensity light increases the expression of the gene for phytoene synthase (EgcrtB) in Euglena gracilis (a unicellular phytoflagellate), the encoded enzyme catalyzes the first committed step of the carotenoid biosynthesis pathway. To examine carotenoid synthesis of E. gracilis in response to light stress, we analyzed carotenoid species and content in cells grown under various light intensities. In addition, we investigated the effect of suppressing EgcrtB with RNA interference (RNAi) on growth and carotenoid content.

resultsAfter cultivation for 7 days under continuous light at 920 μmol m

conclusionsOur results indicate that suppression of EgcrtB causes a significant decrease in carotenoid and chlorophyll content in E. gracilis accompanied by changes in intracellular structures, suggesting that Dtx (de-epoxidized form of diadinoxanthin cycle pigments) contributes to photoprotection of this alga during the long-term acclimation to light-induced stress.

Indexed as

CarotenoidsChlorophyllChlorophyll AEuglena gracilisGene SilencingGenes, ProtozoanGeranylgeranyl-Diphosphate GeranylgeranyltransferaseLight(all-E) phytoeneCarotenoidsChlorophyllChlorophyll Achlorophyll bGeranylgeranyl-Diphosphate GeranylgeranyltransferaseCarotenoidcrtBDouble-stranded RNAEuglena gracilisHPLCLight-induced stressPhytoene synthaseRNA interferenceThylakoidTransmission electron microscopy

Identifiers

PMID28716091
PMCPMC5513367
OpenAlexW2736119747

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.