Evidence map›Paper›PMID 28715488›Full record

ArticlePLoS pathogens2017

microRNA dependent and independent deregulation of long non-coding RNAs by an oncogenic herpesvirus.

Sunantha Sethuraman, Lauren Appleby Gay, Vaibhav Jain, Irina Haecker, Rolf Renne

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sunantha SethuramanDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, Florida, United States of America.ORCID http://orcid.org/0000-0003-2636-5983
Lauren Appleby GayDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, Florida, United States of America.ORCID http://orcid.org/0000-0001-5715-6717
Vaibhav JainDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, Florida, United States of America.
Irina HaeckerDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, Florida, United States of America.ORCID http://orcid.org/0000-0003-4022-4853
Rolf RenneDepartment of Molecular Genetics and Microbiology, University of Florida, Gainesville, Florida, United States of America.ORCID http://orcid.org/0000-0001-7391-8806
University of Florida · USUniversity of Florida Health · US

Funding

"Project 3" MHV68 IncRNA/miRNA interaction in latency and lympomagenesisP01CA214091 · NCI · UNIVERSITY OF FLORIDA · PI Scott A. Tibbetts · 2017 to 2026
$15.9M
Studying the role of KSHV-encoded miRNAsR01CA119917 · NCI · UNIVERSITY OF FLORIDA · PI RENNE, ROLF F · 2008 to 2017
$3.2M
Identification of KSHV miRNA targets in endothelial cells and characterization miF31CA180522 · NCI · UNIVERSITY OF FLORIDA · PI GAY, LAUREN APPLEBY · 2013 to 2015
$103k
NCI NIH HHS F31 CA180522NCI NIH HHS P01 CA214091NCI NIH HHS R01 CA119917
6 · The paper itself

Abstract

Kaposi's sarcoma (KS) is a highly prevalent cancer in AIDS patients, especially in sub-Saharan Africa. Kaposi's sarcoma-associated herpesvirus (KSHV) is the etiological agent of KS and other cancers like Primary Effusion Lymphoma (PEL). In KS and PEL, all tumors harbor latent KSHV episomes and express latency-associated viral proteins and microRNAs (miRNAs). The exact molecular mechanisms by which latent KSHV drives tumorigenesis are not completely understood. Recent developments have highlighted the importance of aberrant long non-coding RNA (lncRNA) expression in cancer. Deregulation of lncRNAs by miRNAs is a newly described phenomenon. We hypothesized that KSHV-encoded miRNAs deregulate human lncRNAs to drive tumorigenesis. We performed lncRNA expression profiling of endothelial cells infected with wt and miRNA-deleted KSHV and identified 126 lncRNAs as putative viral miRNA targets. Here we show that KSHV deregulates host lncRNAs in both a miRNA-dependent fashion by direct interaction and in a miRNA-independent fashion through latency-associated proteins. Several lncRNAs that were previously implicated in cancer, including MEG3, ANRIL and UCA1, are deregulated by KSHV. Our results also demonstrate that KSHV-mediated UCA1 deregulation contributes to increased proliferation and migration of endothelial cells.

Indexed as

Cell LineHerpesvirus 8, HumanHost-Pathogen InteractionsHumansMicroRNAsRNA, Long NoncodingRNA, ViralSarcoma, KaposiViral ProteinsVirus LatencyMicroRNAsRNA, Long NoncodingRNA, ViralViral Proteins

Identifiers

PMID28715488
PMCPMC5531683
OpenAlexW2736203409

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.