Evidence map›Paper›PMID 28715485›Full record

ArticlePloS one2017

Characterization of the maize lipoxygenase gene family in relation to aflatoxin accumulation resistance.

Oluwaseun F Ogunola, Leigh K Hawkins, Erik Mylroie, Michael V Kolomiets, Eli Borrego, Juliet D Tang, W Paul Williams, Marilyn L Warburton

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Functional Study of Lipoxygenase-Mediated Resistance againstInternational journal of molecular sciences · 2022
    Article
  17. Article
  18. Identification and Characterization of Jasmonic Acid Biosynthetic Genes inInternational journal of molecular sciences · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Oluwaseun F OgunolaDepartment of Plant and Soil Sciences, Mississippi State University, Starkville, MS, United States of America.
Leigh K HawkinsUSDA-ARS Corn Host Plant Resistance Research Unit, Starkville, MS, United States of America.
Erik MylroieUSDA-ARS Corn Host Plant Resistance Research Unit, Starkville, MS, United States of America.
Michael V KolomietsDepartment of Plant Pathology and Microbiology, Texas A&M University, College Station, Texas, United States of America.
Eli BorregoDepartment of Plant Pathology and Microbiology, Texas A&M University, College Station, Texas, United States of America.
Juliet D TangUSDA FS Forest Products Laboratory, Durability and Wood Protection, Starkville, MS, United States of America.
W Paul WilliamsUSDA-ARS Corn Host Plant Resistance Research Unit, Starkville, MS, United States of America.
Marilyn L WarburtonUSDA-ARS Corn Host Plant Resistance Research Unit, Starkville, MS, United States of America.ORCID http://orcid.org/0000-0002-9542-9912
Agricultural Research Service · USTexas A&M University · USForest Products Laboratory · USMississippi State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Maize (Zea mays L.) is a globally important staple food crop prone to contamination by aflatoxin, a carcinogenic secondary metabolite produced by the fungus Aspergillus flavus. An efficient approach to reduce accumulation of aflatoxin is the development of germplasm resistant to colonization and toxin production by A. flavus. Lipoxygenases (LOXs) are a group of non-heme iron containing dioxygenase enzymes that catalyze oxygenation of polyunsaturated fatty acids (PUFAs). LOX derived oxylipins play critical roles in plant defense against pathogens including A. flavus. The objectives of this study were to summarize sequence diversity and expression patterns for all LOX genes in the maize genome, and map their effect on aflatoxin accumulation via linkage and association mapping. In total, 13 LOX genes were identified, characterized, and mapped. The sequence of one gene, ZmLOX10, is reported from 5 inbred lines. Genes ZmLOX1/2, 5, 8, 9, 10 and 12 (GRMZM2G156861, or V4 numbers ZM00001D042541 and Zm00001D042540, GRMZM2G102760, GRMZM2G104843, GRMZM2G017616, GRMZM2G015419, and GRMZM2G106748, respectively) fell under previously published QTL in one or more mapping populations and are linked to a measurable reduction of aflatoxin in maize grains. Association mapping results found 28 of the 726 SNPs tested were associated with reduced aflatoxin levels at p ≤ 9.71 x 10-4 according to association statistics. These fell within or near nine of the ZmLOX genes. This work confirms the importance of some lipoxygenases for resistance to aflatoxin accumulation and may be used to direct future genetic selection in maize.

Indexed as

AflatoxinsAspergillosisAspergillus flavusChromosome MappingGene ExpressionGenetic Association StudiesGenetic LinkageGenetic Predisposition to DiseaseLipoxygenasePhylogenyPlant DiseasesPlant ProteinsPolymorphism, Single NucleotideZea maysAflatoxinsLipoxygenasePlant Proteins

Identifiers

PMID28715485
PMCPMC5513560
OpenAlexW2734653938

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.