Evidence map›Paper›PMID 28714913›Full record

ArticleViruses2017

Novel Fri1-like Viruses Infecting Acinetobacter baumannii-vB_AbaP_AS11 and vB_AbaP_AS12-Characterization, Comparative Genomic Analysis, and Host-Recognition Strategy.

Anastasia V Popova, Daria G Lavysh, Evgeniy I Klimuk, Mikhail V Edelstein, Alexander G Bogun, Mikhail M Shneider, Artemiy E Goncharov, Sergey V Leonov, Konstantin V Severinov

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 48 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. A conserved KL2-capsule-related phage-resistant mechanism in carbapenem-resistantFrontiers in cellular and infection microbiology · 2026
    Article
  4. Article
  5. Article
  6. Phage Therapy forAntibiotics (Basel, Switzerland) · 2025
    Review
  7. Genome assembly ofMicrobiology resource announcements · 2025
    Article
  8. Article
  9. Article
  10. Lytic Capsule-SpecificViruses · 2024
    Article
  11. Functional domains ofFrontiers in microbiology · 2024
    Article
  12. Review
  13. Article
  14. International journal of molecular sciences · 2023
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Capsule-Targeting Depolymerases Derived fromInternational journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 8 institutions in 2 countries.

Anastasia V PopovaInstitute of Antimicrobial Chemotherapy, Smolensk State Medical University, Smolensk, Russian Federation. popova_nastya86@mail.ru.
Daria G LavyshInstitute of Antimicrobial Chemotherapy, Smolensk State Medical University, Smolensk, Russian Federation. lavyshd@gmail.com.
Evgeniy I KlimukInstitute of Antimicrobial Chemotherapy, Smolensk State Medical University, Smolensk, Russian Federation. jonikl@gmail.com.
Mikhail V EdelsteinInstitute of Antimicrobial Chemotherapy, Smolensk State Medical University, Smolensk, Russian Federation. Mikhail.Edelstein@antibiotic.ru.
Alexander G BogunState Researсh Center for Applied Microbiology and Biotechnology, Moscow region, Obolensk, Russian Federation. bogun62@mail.ru.
Mikhail M ShneiderShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russian Federation. mikhailshneider@gmail.com.
Artemiy E GoncharovNorth-Western State Medical University named after I.I. Mechnikov, Saint-Petersburg, Russian Federation. phage1@yandex.ru.
Sergey V LeonovMoscow Institute of Physics and Technology (State University), Moscow region, Dolgoprudny, Russian Federation. sl@pharmcluster.ru.
Konstantin V SeverinovInstitute of Molecular Genetics and Gene Biology, Russian Academy of Sciences, Moscow, Russian Federation. severik@waksman.rutgers.edu.
Moscow Institute of Physics and Technology · RUInstitute of Bioorganic Chemistry · RUInstitute of Gene Biology · RURutgers, The State University of New Jersey · USSkolkovo Institute of Science and Technology · RUSmolensk State Medical University · RUState Research Center for Applied Microbiology and Biotechnology · RUSt Petersburg University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acinetobacter baumannii is a gram-negative, non-fermenting aerobic bacterium which is often associated with hospital-acquired infections and known for its ability to develop resistance to antibiotics, form biofilms, and survive for long periods in hospital environments. In this study, we present two novel viruses, vB_AbaP_AS11 and vB_AbaP_AS12, specifically infecting and lysing distinct multidrug-resistant clinical A. baumannii strains with K19 and K27 capsular polysaccharide structures, respectively. Both phages demonstrate rapid adsorption, short latent periods, and high burst sizes in one-step growth experiments. The AS11 and AS12 linear double-stranded DNA genomes of 41,642 base pairs (bp) and 41,402 bp share 86.3% nucleotide sequence identity with the most variable regions falling in host receptor-recognition genes. These genes encode tail spikes possessing depolymerizing activities towards corresponding capsular polysaccharides which are the primary bacterial receptors. We described AS11 and AS12 genome organization and discuss the possible regulation of transcription. The overall genomic architecture and gene homology analyses showed that the phages are new representatives of the recently designated Fri1virus genus of the Autographivirinae subfamily within the Podoviridae family.

Indexed as

Acinetobacter baumanniiAcinetobacter InfectionsAnti-Bacterial AgentsDNA-Directed RNA PolymerasesDNA, ViralDrug Resistance, Multiple, BacterialGenome, ViralHost SpecificityHumansPhylogenyPodoviridaePolysaccharides, BacterialViral ProteinsAnti-Bacterial AgentsDNA-Directed RNA PolymerasesDNA, ViralK19 capsular polysaccharide, Acinetobacter baumanniiPolysaccharides, BacterialViral ProteinsAcinetobacter baumanniibacteriophagecapsule typesFri1virusPodoviridaeRNA polymerasetail spike

Identifiers

PMID28714913
PMCPMC5537680
OpenAlexW2734939952

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.