Evidence map›Paper›PMID 28714473›Full record

ArticleNature communications2017

Prioritizing multiple therapeutic targets in parallel using automated DNA-encoded library screening.

Carl A Machutta, Christopher S Kollmann, Kenneth E Lind, Xiaopeng Bai, Pan F Chan, Jianzhong Huang, Lluis Ballell, Svetlana Belyanskaya, Gurdyal S Besra, David Barros-Aguirre and 55 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 74 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Building Block-Centric Approach to DNA-Encoded Library Design.Journal of chemical information and modeling · 2024
    Article
  6. Inhibitors of the Thioesterase Activity ofACS infectious diseases · 2024
    Article
  7. Article
  8. Review
  9. Small-molecule discovery through DNA-encoded libraries.Nature reviews. Drug discovery · 2023
    Review
  10. Translating the Genome into Drugs.Accounts of chemical research · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Targets and Antibody Formats for Immunotherapy of Neuroblastoma.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2020
    Review
  18. Beyond protein binding: recent advances in screening DNA-encoded libraries.Chemical communications (Cambridge, England) · 2019
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

65 authors at 4 institutions in 3 countries.

Carl A MachuttaGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Christopher S KollmannGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Kenneth E LindGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Xiaopeng BaiGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Pan F ChanGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Jianzhong HuangGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Lluis BallellGlaxoSmithKline, Severo Ochoa 2, Tres Cantos, Madrid 28760, Spain.
Svetlana BelyanskayaGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Gurdyal S BesraUniversity of Birmingham, School of Biosciences, Edgbaston, Birmingham B15 2TT, UK.ORCID 0000-0002-5605-0395
David Barros-AguirreGlaxoSmithKline, Severo Ochoa 2, Tres Cantos, Madrid 28760, Spain.
Robert H BatesGlaxoSmithKline, Severo Ochoa 2, Tres Cantos, Madrid 28760, Spain.
Paolo A CentrellaGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Sandy S ChangGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Jing ChaiGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Anthony E ChoudhryGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Aaron CoffinGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Christopher P DavieGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Hongfeng DengGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Jianghe DengGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Yun DingGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Jason W DodsonGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
David T FosbennerGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Enoch N GaoGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Taylor L GrahamGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Todd L GraybillGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Karen IngrahamGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Walter P JohnsonGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Bryan W KingGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Christopher R KwiatkowskiGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Joël LelièvreGlaxoSmithKline, Severo Ochoa 2, Tres Cantos, Madrid 28760, Spain.
Yue LiGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Xiaorong LiuGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Quinn LuGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Ruth LehrGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Alfonso Mendoza-LosanaGlaxoSmithKline, Severo Ochoa 2, Tres Cantos, Madrid 28760, Spain.
John MartinGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Lynn McCloskeyGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Patti McCormickGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Heather P O'KeefeGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Thomas O'KeeffeGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Christina PaoGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Christopher B PhelpsGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Hongwei QiGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Keith RaffertyGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Genaro S ScavelloGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Matt S SteigingaGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Flora S SundersinghGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Sharon M SweitzerGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Lawrence M SzewczukGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Amy TaylorGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
May Fern TohGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Juan WangGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Minghui WangGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Devan J WilkinsGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Bing XiaGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Gang YaoGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Jean ZhangGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Jingye ZhouGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Christine P DonahueGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Jeffrey A MesserGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
David HolmesGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Christopher C Arico-MuendelGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
Andrew J PopeGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Jeffrey W GrossGlaxoSmithKline, 1250 South Collegeville Road, Collegeville, Pennsylvania 19426, USA.
Ghotas EvindarGlaxoSmithKline, 830 Winter Street, Waltham, Massachusetts 02451, USA.
South College · USGlaxoSmithKline (United States) · USGlaxoSmithKline (Spain) · ESUniversity of Birmingham · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The identification and prioritization of chemically tractable therapeutic targets is a significant challenge in the discovery of new medicines. We have developed a novel method that rapidly screens multiple proteins in parallel using DNA-encoded library technology (ELT). Initial efforts were focused on the efficient discovery of antibacterial leads against 119 targets from Acinetobacter baumannii and Staphylococcus aureus. The success of this effort led to the hypothesis that the relative number of ELT binders alone could be used to assess the ligandability of large sets of proteins. This concept was further explored by screening 42 targets from Mycobacterium tuberculosis. Active chemical series for six targets from our initial effort as well as three chemotypes for DHFR from M. tuberculosis are reported. The findings demonstrate that parallel ELT selections can be used to assess ligandability and highlight opportunities for successful lead and tool discovery.

Indexed as

Gene LibrarySmall Molecule LibrariesAcinetobacter baumanniiAnti-Bacterial AgentsDrug DiscoveryDrug Evaluation, PreclinicalMolecular Targeted TherapyMycobacterium tuberculosisStaphylococcus aureusAnti-Bacterial AgentsSmall Molecule Libraries

Identifiers

PMID28714473
PMCPMC5520047
OpenAlexW2734380512

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.