Evidence map›Paper›PMID 28710456›Full record

ArticleScientific reports2017

Genomic insights into the virulence and salt tolerance of Staphylococcus equorum.

Do-Won Jeong, Sojeong Heo, Sangryeol Ryu, Jochen Blom, Jong-Hoon Lee

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Functional Genome Annotation ofJournal of microbiology and biotechnology · 2026
    Article
  2. International journal of systematic and evolutionary microbiology · 2026
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  9. mSphere · 2023
    Article
  10. Antibiotic Resistance/Susceptibility Profiles ofInternational journal of molecular sciences · 2023
    Article
  11. Article
  12. Safety and Technological Characterization ofJournal of microbiology and biotechnology · 2022
    Article
  13. Article
  14. Transcriptome Analysis of HalotolerantFoods (Basel, Switzerland) · 2022
    Article
  15. Article
  16. Functional Genomic Insights into ProbioticFoods (Basel, Switzerland) · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Food-derived coagulase-negativeFood science and biotechnology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Do-Won JeongDepartment of Food and Nutrition, Dongduk Women's University, Seoul, 02748, Republic of Korea.
Sojeong HeoDepartment of Food Science and Biotechnology, Kyonggi University, Suwon, 16227, Republic of Korea.
Sangryeol RyuDepartment of Food and Animal Biotechnology, Department of Agricultural Biotechnology, and Center for Food and Bioconvergence, Seoul National University, Seoul, 08826, Republic of Korea.
Jochen BlomBioinformatics and System Biology, Justus-Liebig-University Giessen, 35392, Giessen, Germany.ORCID 0000-0001-6455-3622
Jong-Hoon LeeDepartment of Food Science and Biotechnology, Kyonggi University, Suwon, 16227, Republic of Korea. jhl@kgu.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To shed light on the genetic background behind the virulence and salt tolerance of Staphylococcus equorum, we performed comparative genome analysis of six S. equorum strains. Data on four previously published genome sequences were obtained from the NCBI database, while those on strain KM1031 displaying resistance to multiple antibiotics and strain C2014 causing haemolysis were determined in this study. Examination of the pan-genome of five of the six S. equorum strains showed that the conserved core genome retained the genes for general physiological processes and survival of the species. In this comparative genomic analysis, the factors that distinguish the strains from each other, including acquired genomic factors in mobile elements, were identified. Additionally, the high salt tolerance of strains enabling growth at a NaCl concentration of 25% (w/v) was attributed to the genes encoding potassium voltage-gated channels. Among the six strains, KS1039 does not possess any of the functional virulence determinants expressed in the other strains.

Indexed as

Gene Expression Regulation, NeoplasticGenome, BacterialAnti-Bacterial AgentsBacterial ProteinsConserved SequenceDatabases, GeneticDrug Resistance, Multiple, BacterialGene Expression ProfilingPotassium Channels, Voltage-GatedSalt ToleranceSodium ChlorideStaphylococcusVirulenceAnti-Bacterial AgentsBacterial ProteinsPotassium Channels, Voltage-GatedSodium Chloride

Identifiers

PMID28710456
PMCPMC5511256

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.