Evidence map›Paper›PMID 28710453›Full record

ArticleScientific reports2017

Intrinsic dynamics study identifies two amino acids of TIMP-1 critical for its LRP-1-mediated endocytosis in neurons.

Laurie Verzeaux, Nicolas Belloy, Jessica Thevenard-Devy, Jérôme Devy, Géraldine Ferracci, Laurent Martiny, Stéphane Dedieu, Manuel Dauchez, Hervé Emonard, Nicolas Etique and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. MMPs in learning and memory and neuropsychiatric disorders.Cellular and molecular life sciences : CMLS · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Laurie VerzeauxCNRS UMR 7369: Matrice Extracellulaire et Dynamique Cellulaire (MEDyC), UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne (URCA), Laboratoire SiRMa - Campus Moulin de la Housse, BP 1039, 51687, Reims cedex, France.
Nicolas BelloyCNRS UMR 7369: Matrice Extracellulaire et Dynamique Cellulaire (MEDyC), UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne (URCA), Laboratoire SiRMa - Campus Moulin de la Housse, BP 1039, 51687, Reims cedex, France.ORCID 0000-0002-6003-3184
Jessica Thevenard-DevyCNRS UMR 7369: Matrice Extracellulaire et Dynamique Cellulaire (MEDyC), UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne (URCA), Laboratoire SiRMa - Campus Moulin de la Housse, BP 1039, 51687, Reims cedex, France.
Jérôme DevyCNRS UMR 7369: Matrice Extracellulaire et Dynamique Cellulaire (MEDyC), UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne (URCA), Laboratoire SiRMa - Campus Moulin de la Housse, BP 1039, 51687, Reims cedex, France.
Géraldine FerracciAix-Marseille Université, CNRS, Centre de Recherche en Neurobiologie et Neurophysiologie de Marseille (CRN2M), UMR 7286, Plate-forme de Recherche en Neurosciences (PFRN), Marseille, France.
Laurent MartinyCNRS UMR 7369: Matrice Extracellulaire et Dynamique Cellulaire (MEDyC), UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne (URCA), Laboratoire SiRMa - Campus Moulin de la Housse, BP 1039, 51687, Reims cedex, France.
Stéphane DedieuCNRS UMR 7369: Matrice Extracellulaire et Dynamique Cellulaire (MEDyC), UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne (URCA), Laboratoire SiRMa - Campus Moulin de la Housse, BP 1039, 51687, Reims cedex, France.
Manuel DauchezCNRS UMR 7369: Matrice Extracellulaire et Dynamique Cellulaire (MEDyC), UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne (URCA), Laboratoire SiRMa - Campus Moulin de la Housse, BP 1039, 51687, Reims cedex, France.
Hervé EmonardCNRS UMR 7369: Matrice Extracellulaire et Dynamique Cellulaire (MEDyC), UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne (URCA), Laboratoire SiRMa - Campus Moulin de la Housse, BP 1039, 51687, Reims cedex, France.ORCID 0000-0002-8360-1594
Nicolas EtiqueCNRS UMR 7369: Matrice Extracellulaire et Dynamique Cellulaire (MEDyC), UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne (URCA), Laboratoire SiRMa - Campus Moulin de la Housse, BP 1039, 51687, Reims cedex, France. nicolas.etique@univ-reims.fr.ORCID 0000-0001-6613-9257
Emmanuelle Devarenne-CharpentierCNRS UMR 7369: Matrice Extracellulaire et Dynamique Cellulaire (MEDyC), UFR Sciences Exactes et Naturelles, Université de Reims Champagne-Ardenne (URCA), Laboratoire SiRMa - Campus Moulin de la Housse, BP 1039, 51687, Reims cedex, France.
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The tissue inhibitor of metalloproteinases-1 (TIMP-1) exerts inhibitory activity against matrix metalloproteinases and cytokine-like effects. We previously showed that TIMP-1 reduces neurite outgrowth in mouse cortical neurons and that this cytokine-like effect depends on TIMP-1 endocytosis mediated by the low-density lipoprotein receptor-related protein-1 (LRP-1). To gain insight into the interaction between TIMP-1 and LRP-1, we considered conformational changes that occur when a ligand binds to its receptor. TIMP-1 conformational changes have been studied using biomolecular simulations, and our results provide evidence for a hinge region that is critical for the protein movement between the N- and C-terminal TIMP-1 domains. In silico mutants have been proposed on residues F12 and K47, which are located in the hinge region. Biological analyses of these mutants show that F12A or K47A mutation does not alter MMP inhibitory activity but impairs the effect of TIMP-1 on neurite outgrowth. Interestingly, these mutants bind to LRP-1 but are not endocytosed. We conclude that the intrinsic dynamics of TIMP-1 are not involved in its binding to LRP-1 but rather in the initiation of endocytosis and associated biological effects.

Indexed as

EndocytosisAmino AcidsAnimalsCells, CulturedLow Density Lipoprotein Receptor-Related Protein-1MiceMolecular Dynamics SimulationMutant ProteinsNeuronsProtein ConformationProtein Interaction MappingReceptors, LDLTissue Inhibitor of Metalloproteinase-1Tumor Suppressor ProteinsAmino AcidsLow Density Lipoprotein Receptor-Related Protein-1Lrp1 protein, mouseMutant ProteinsReceptors, LDLTissue Inhibitor of Metalloproteinase-1Tumor Suppressor Proteins

Identifiers

PMID28710453
PMCPMC5511134
OpenAlexW2736086782

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.