Evidence map›Paper›PMID 28708422›Full record

ArticleAmerican journal of respiratory cell and molecular biology2017

The Epithelial Sodium Channel Is a Modifier of the Long-Term Nonprogressive Phenotype Associated with F508del CFTR Mutations.

Pankaj B Agrawal, Ruobing Wang, Hongmei Lisa Li, Klaus Schmitz-Abe, Chantelle Simone-Roach, Jingxin Chen, Jiahai Shi, Tin Louie, Shaohu Sheng, Meghan C Towne and 8 more

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Cystic fibrosis.Nature reviews. Disease primers · 2024
    Review
  4. Epithelial NaComprehensive Physiology · 2024
    Review
  5. Furin as a therapeutic target in cystic fibrosis airways disease.European respiratory review : an official journal of the European Respiratory Society · 2023
    Review
  6. Preclinical evaluation of the epithelial sodium channel inhibitor AZD5634 and implications on human translation.American journal of physiology. Lung cellular and molecular physiology · 2022
    Article
  7. Article
  8. Article
  9. DNA Methylation Patterns Correlate with the Expression ofInternational journal of molecular sciences · 2021
    Article
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  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 11 institutions in 5 countries.

Pankaj B AgrawalDivisions of 1 Newborn Medicine.
Ruobing Wang4 Pulmonary and Respiratory Diseases, and.
Hongmei Lisa Li5 Stem Cell Program, Division of Hematology/Oncology, Boston Children's Hospital, Boston, Massachusetts.
Klaus Schmitz-Abe2 Genetics and Genomics.
Chantelle Simone-Roach4 Pulmonary and Respiratory Diseases, and.
Jingxin ChenDepartments of 8 Medicine.
Jiahai Shi9 Department of Biomedical Sciences, City University of Hong Kong, Kowloon, Hong Kong SAR.
Tin Louie10 Biostatistics and Center for Biomedical Statistics.
Shaohu ShengDepartments of 8 Medicine.
Meghan C Towne2 Genetics and Genomics.
Christine F Brainson11 Toxicology and Cancer Biology, University of Kentucky, Lexington, Kentucky; and.
Michael A MatthayDepartments of 12 Medicine and.
Carla F Kim4 Pulmonary and Respiratory Diseases, and.
Michael Bamshad14 Pediatrics and Genome Sciences, University of Washington, Seattle, Washington.
Mary J Emond10 Biostatistics and Center for Biomedical Statistics.
Norma P Gerard4 Pulmonary and Respiratory Diseases, and.
Thomas R KleymanDepartments of 8 Medicine.
Craig Gerard4 Pulmonary and Respiratory Diseases, and.
Institut thématique Génétique, génomique et bioinformatique · FRPulmonary Associates · USBoston Children's Hospital · USCancer Research And Biostatistics · USUniversity Of Medicine 1 Yangon · MMBeth Israel Deaconess Medical Center · USCity University of Hong Kong · HKUniversity of California, San Francisco · USUniversity of Kentucky · USUniversity of Pittsburgh · USUniversity of Washington · US

Funding

Single Nephron and MetabolomicsP30DK079307 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KLEYMAN, THOMAS R · 2008 to 2022
$13.4M
Microenvironmental control of progenitors in organ dysfunction and repairU01HL100402 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI KIM, CARLA F., SCADDEN, DAVID T · 2009 to 2015
$8.5M
Genome Sequence-Based Screening for Childhood Risk and Newborn IllnessU19HD077671 · NICHD · BRIGHAM AND WOMEN'S HOSPITAL · PI BEGGS, ALAN H., GREEN, ROBERT C. · 2013 to 2018
$6.1M
Mouse Neurodevelopmental Behavior CoreU54HD090255 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI POMEROY, SCOTT LOREN · 2016 to 2020
$5.2M
Resolution of Clinical Lung InjuryR37HL051856 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MATTHAY, MICHAEL A. · 2006 to 2015
$3.9M
SPEG is Critical in Skeletal Muscle Development and FunctionR01AR068429 · NIAMS · BOSTON CHILDREN'S HOSPITAL · PI AGRAWAL, PANKAJ B · 2015 to 2019
$1.9M
In Vivo and In Vitro Characterization of Bronchio-Alveolar Stem CellsR01HL090136 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI KIM, CARLA F. · 2007 to 2010
$1.9M
Signaling pathways in lung stem cell differentiationR01HL125821 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI KIM, CARLA F. · 2015 to 2018
$1.8M
Mechanisms of Thrombospondin-1 as a pulmonary vascular mediatorR01HL132266 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI KIM, CARLA F. · 2017 to 2020
$1.6M
NHLBI NIH HHS R01 HL090136NHLBI NIH HHS R01 HL125821NHLBI NIH HHS R01 HL132266NHLBI NIH HHS R37 HL051856NHLBI NIH HHS U01 HL100402NIAMS NIH HHS R01 AR068429NICHD NIH HHS U19 HD077671NICHD NIH HHS U54 HD090255NIDDK NIH HHS P30 DK079307
6 · The paper itself

Abstract

Cystic fibrosis (CF) remains the most lethal genetic disease in the Caucasian population. However, there is great variability in clinical phenotypes and survival times, even among patients harboring the same genotype. We identified five patients with CF and a homozygous F508del mutation in the CFTR gene who were in their fifth or sixth decade of life and had shown minimal changes in lung function over a longitudinal period of more than 20 years. Because of the rarity of this long-term nonprogressive phenotype, we hypothesized these individuals may carry rare genetic variants in modifier genes that ameliorate disease severity. Individuals at the extremes of survival time and lung-function trajectory underwent whole-exome sequencing, and the sequencing data were filtered to include rare missense, stopgain, indel, and splicing variants present with a mean allele frequency of <0.2% in general population databases. Epithelial sodium channel (ENaC) mutants were generated via site-directed mutagenesis and expressed for Xenopus oocyte assays. Four of the five individuals carried extremely rare or never reported variants in the SCNN1D and SCNN1B genes of the ENaC. Separately, an independently enriched rare variant in SCNN1D was identified in the Exome Variant Server database associated with a milder pulmonary disease phenotype. Functional analysis using Xenopus oocytes revealed that two of the three variants in δ-ENaC encoded by SCNN1D exhibited hypomorphic channel activity. Our data suggest a potential role for δ-ENaC in controlling sodium reabsorption in the airways, and advance the plausibility of ENaC as a therapeutic target in CF.

Indexed as

Amino Acid SequenceSequence DeletionAnimalsCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorEpithelial Sodium ChannelsFemaleHumansMaleXenopusXenopus laevisCFTR protein, humanCystic Fibrosis Transmembrane Conductance RegulatorEpithelial Sodium ChannelsSCNN1B protein, humanSCNN1D protein, humancystic fibrosisENaCepithelial sodium channelgenetic modifierSCNN1D

Identifiers

PMID28708422
PMCPMC5765421
OpenAlexW2735742644

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.