Evidence map›Paper›PMID 28707108›Full record

ArticleLung2017

Clinical and Biological Insights from the University of California San Francisco Prospective and Longitudinal Cohort.

Bryan S Benn, Zoe Lehman, Sharon A Kidd, Melissa Ho, Sara Sun, Joris Ramstein, Nicholas K Arger, Christine P Nguyen, Robert Su, Antonio Gomez and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Lung, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Overview of multi-omics approaches for pulmonary sarcoidosis.EC pulmonology and respiratory medicine · 2025
    Article
  6. Molecular profiling in sarcoidosis.Current opinion in pulmonary medicine · 2020
    Review
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Bryan S BennDivision of Pulmonary and Critical Care, University of California, San Francisco, San Francisco, CA, 94143, USA.
Zoe LehmanDivision of Pulmonary and Critical Care, University of California, San Francisco, San Francisco, CA, 94143, USA.
Sharon A KiddDivision of Pulmonary and Critical Care, University of California, San Francisco, San Francisco, CA, 94143, USA.
Melissa HoDivision of Pulmonary and Critical Care, University of California, San Francisco, San Francisco, CA, 94143, USA.
Sara SunDivision of Pulmonary and Critical Care, University of California, San Francisco, San Francisco, CA, 94143, USA.
Joris RamsteinDivision of Pulmonary and Critical Care, University of California, San Francisco, San Francisco, CA, 94143, USA.
Nicholas K ArgerDivision of Pulmonary and Critical Care, University of California, San Francisco, San Francisco, CA, 94143, USA.
Christine P NguyenDivision of Pulmonary and Critical Care, University of California, San Francisco, San Francisco, CA, 94143, USA.
Robert SuPalo Alto Medical Foundation, Palo Alto, CA, USA.
Antonio GomezDivision of Pulmonary and Critical Care Medicine, Zuckerberg San Francisco General Hospital & Trauma Center, San Francisco, CA, USA.
Jeffrey M GelfandDepartment of Neurology, Multiple Sclerosis and Neuroinflammation Center, University of California, San Francisco, San Francisco, CA, USA.
Laura L KothDivision of Pulmonary and Critical Care, University of California, San Francisco, San Francisco, CA, 94143, USA. laura.koth@ucsf.edu.ORCID http://orcid.org/0000-0001-9541-3622
University of California, San Francisco · USPalo Alto Institute · USSan Francisco General Hospital · US

Funding

Genomic Phenotyping and Mechanisms in sarcoidosis and AATU01HL112696 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GARCIA, JOE G. N., KOTH, LAURA L · 2012 to 2014
$470k
National Heart, Lung, and Blood Institute U01HL112696National Institute of Allergy and Infectious Diseases R01AI087652
6 · The paper itself

Abstract

introductionSarcoidosis is a systemic inflammatory disease characterized by non-necrotizing granulomas in involved organs, most commonly the lung. Description of patient characteristics in the Western United States is limited. Furthermore, blood-based measures that relate to clinical sarcoidosis phenotypes are lacking. We present an analysis of a prospective, longitudinal sarcoidosis cohort at a Northern Californian academic medical center.

methodsWe enrolled 126 sarcoidosis subjects and 64 healthy controls and recorded baseline demographic and clinical characteristics. We used regression models to identify factors independently associated with pulmonary physiology. We tested whether blood transcript levels at study entry could relate to longitudinal changes in pulmonary physiology.

resultsWhite, non-Hispanics composed ~70% of subjects. Hispanics and Blacks had a diagnostic biopsy at an age ~7 years younger than whites. Obstructive, but not restrictive, physiology characterized Scadding Stage IV patients. Subjects reporting use of immunosuppression had worse FEV1%p, FVC%p, and DLCO%p compared to subjects never treated, regardless of Scadding stage. We defined sarcoidosis disease activity by a drop in pulmonary function over 36 months and found that subjects meeting this definition had significant repression of blood gene transcripts related to T cell receptor signaling pathways, referred to as the "TCR factor."

conclusionObstructive pulmonary physiology defined Stage IV patients which were mostly white, non-Hispanics. Genes comprising the composite gene expression score, TCR factor, may represent a blood-derived measure of T-cell activity and an indirect measure of active sarcoidosis inflammation. Validation of this measure could translate into individualized treatment for sarcoidosis patients.

Indexed as

AdultAgedAge FactorsBlack or African AmericanCarbon MonoxideCase-Control StudiesCohort StudiesFemaleForced Expiratory VolumeHispanic or LatinoHumansImmunosuppressive AgentsLongitudinal StudiesMaleMiddle AgedProspective StudiesCarbon MonoxideImmunosuppressive AgentsReceptors, Antigen, T-CellGene expressionObstructive lung diseaseSarcoidosisT cell

Identifiers

PMID28707108
OpenAlexW2734677776

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.