Evidence map›Paper›PMID 28706437›Full record

ArticleMolecular vision2017

Comparison of two neurotrophic serpins reveals a small fragment with cell survival activity.

Paige N Winokur, Preeti Subramanian, Jeanee L Bullock, Veronique Arocas, S Patricia Becerra

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular vision, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Delivery Systems of Retinoprotective Proteins in the Retina.International journal of molecular sciences · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Signaling Mechanisms Involved in PEDF-Mediated Retinoprotection.Advances in experimental medicine and biology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Paige N WinokurNIH, NEI, Section of Protein Structure and Function, Bethesda, MD.
Preeti SubramanianNIH, NEI, Section of Protein Structure and Function, Bethesda, MD.
Jeanee L BullockNIH, NEI, Section of Protein Structure and Function, Bethesda, MD.
Veronique ArocasU1148 Inserm, Bâtiment Inserm, Hôpital Bichat, Paris, France.
S Patricia BecerraNIH, NEI, Section of Protein Structure and Function, Bethesda, MD.
National Institutes of Health · USInserm · FR

Funding

Role of Protein Interactions in Retina Development and FunctionZIAEY000306 · NEI · NATIONAL EYE INSTITUTE · PI BECERRA, S. PATRICIA · 2009 to 2025
$15.6M
6 · The paper itself

Abstract

purposeProtease nexin-1 (PN-1), a serpin encoded by the

methodsSequence comparisons were performed using computer bioinformatics programs. Mouse and bovine eyes, human retina tissue, and ARPE-19 cells were used to prepare RNA and protein samples. Interphotoreceptor matrix lavage was obtained from bovine eyes. Gene expression and protein levels were evaluated with reverse-transcription PCR (RT-PCR) and western blotting, respectively. Recombinant human PN-1, a version of PN-1 referred to as PN-1[R346A] lacking serine protease inhibitory activity, and PEDF proteins were used, as well as synthetic peptides designed from PEDF and PN-1 sequences. Survival activity in serum-starved, rat-derived retinal precursor (R28) cells was assessed with terminal deoxynucleotidyl transferase (TdT) dUTP nick-end labeling (TUNEL) cell death assays.

resultsPN-1 is analogous in primary and tertiary structure to PEDF. A region in PN-1 shares homology with the neurotrophic active region of PEDF, a 17-residue region within alpha helix C. The native human retina, ARPE-19 cells, and murine RPE and retina expressed the gene for PN-1 (

conclusionsPN-1 and PEDF share structural and functional features, and expression patterns in the retina. These serpins' mechanisms of action as cell survival factors are independent of serine protease inhibition. We have identified PN-1 as a novel factor for the retina that may play a neuroprotective role in vivo, and small peptides as relevant candidates for preventing retinal degeneration.

Indexed as

Amino Acid SequenceAnimalsApoptosisCattleCell LineCell SurvivalCytoprotectionEyeEye ProteinsHumansMice, Inbred C57BLNerve Growth FactorsPigment Epithelium-Derived FactorProtein Structure, TertiaryProto-Oncogene Proteins c-bcl-2RatsEye ProteinsNerve Growth FactorsPigment Epithelium-Derived FactorProto-Oncogene Proteins c-bcl-2RNA, MessengerSerpin E2Serpins

Identifiers

PMID28706437
PMCPMC5501690
OpenAlexW2724148826

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.