Evidence map›Paper›PMID 28706292›Full record

ArticleScientific reports2017

Genome-wide survey indicates diverse physiological roles of the barley (Hordeum vulgare L.) calcium-dependent protein kinase genes.

Yunqiang Yang, Qiuli Wang, Qian Chen, Xin Yin, Min Qian, Xudong Sun, Yongping Yang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
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  6. Identification ofFrontiers in plant science · 2024
    Article
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  9. Genome-Wide Survey Indicates Diverse Physiological Roles ofInternational journal of molecular sciences · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Yunqiang YangKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650204, China.
Qiuli WangKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650204, China.
Qian ChenKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650204, China.
Xin YinKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650204, China.
Min QianKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650204, China.
Xudong SunKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650204, China. sunxudong@mail.kib.ac.cn.
Yongping YangKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650204, China. yangyp@mail.kib.ac.cn.
Kunming Institute of Botany · CNChinese Academy of Sciences · CNInstitute of Tibetan Plateau Research · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcium-dependent protein kinases (CDPKs) are crucial calcium sensors that play important roles in the regulation of plant growth and developmental processes, as well as protective responses to environmental stress. Here, we identified 28 CDPK genes from barley and cloned 5 new, full-length CDPK genes, MLOC_58648a, MLOC_19618a, MLOC_71733a, AK249361a and MLOC_4965a, using their expressed sequence tags. Phylogenetic and gene structural analyses revealed that the CDPK could be divided into four subgroups. Significant site-specific altered constraints and a high evolutionary rate may have contributed to the functional divergences among CDPK gene subfamilies. Expression profiles of different tissues and developmental stages suggested that several CDPK genes are involved in the functional development of plants. Different expression levels under a variety of abiotic stresses also indicated that the CDPK family underwent functional divergence during long-term evolution. Furthermore, several CDPK genes responded to single treatments and individual CDPK genes responded to multiple treatments, suggesting that barley CDPKs may be involved in mediating cross-talk among different signalling pathways. Our data provide an important foundation for the functional and evolutionary analyses of this important gene family in barley.

Indexed as

Gene Expression Regulation, PlantPlant DevelopmentCalcium-Calmodulin-Dependent Protein KinasesCloning, MolecularGene Expression ProfilingGenotypeHordeumPhylogenyProtein KinasesSequence Analysis, DNACalcium-Calmodulin-Dependent Protein KinasesProtein Kinases

Identifiers

PMID28706292
PMCPMC5509701
OpenAlexW2729332709

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.