Evidence map›Paper›PMID 28703221›Full record

ArticleNature communications2017

Manipulation of nuclear architecture through CRISPR-mediated chromosomal looping.

Stefanie L Morgan, Natasha C Mariano, Abel Bermudez, Nicole L Arruda, Fangting Wu, Yunhai Luo, Gautam Shankar, Lin Jia, Huiling Chen, Ji-Fan Hu and 4 more

Abstract readEvaluation Study
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 154 papers.

0numbers the graph read from it
0cells of the map it votes in
154citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

154 citing papers in PubMed.

  1. Article
  2. Article
  3. 3D Genome Engineering Using CRISPR/dCas Systems.International journal of molecular sciences · 2026
    Review
  4. Review
  5. International journal of molecular medicine · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review

94 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Stefanie L MorganDepartment of Dermatology, Program in Epithelial Biology, Stanford University School of Medicine, Stanford, California 94305, USA.
Natasha C MarianoDepartment of Dermatology, Program in Epithelial Biology, Stanford University School of Medicine, Stanford, California 94305, USA.
Abel BermudezCanary Center for Cancer Early Detection, Department of Radiology, Stanford University School of Medicine, Palo Alto, California 94304, USA.
Nicole L ArrudaBridgewater State University, Department of Biology, Bridgewater, Massachusetts 02325, USA.
Fangting WuSystem Biosciences, Palo Alto, California 94303, USA.
Yunhai LuoDepartment of Dermatology, Program in Epithelial Biology, Stanford University School of Medicine, Stanford, California 94305, USA.
Gautam ShankarDepartment of Dermatology, Program in Epithelial Biology, Stanford University School of Medicine, Stanford, California 94305, USA.
Lin JiaVeterans Affairs Healthcare System, Palo Alto, California 94304, USA.
Huiling ChenVeterans Affairs Healthcare System, Palo Alto, California 94304, USA.
Ji-Fan HuVeterans Affairs Healthcare System, Palo Alto, California 94304, USA.
Andrew R HoffmanVeterans Affairs Healthcare System, Palo Alto, California 94304, USA.
Chiao-Chain HuangSystem Biosciences, Palo Alto, California 94303, USA.
Sharon J PitteriCanary Center for Cancer Early Detection, Department of Radiology, Stanford University School of Medicine, Palo Alto, California 94304, USA.
Kevin C WangDepartment of Dermatology, Program in Epithelial Biology, Stanford University School of Medicine, Stanford, California 94305, USA.

Funding

The Role of Long Noncoding RNAs in CancerI01BX002905 · VA · VETERANS ADMIN PALO ALTO HEALTH CARE SYS · PI HOFFMAN, ANDREW R · 2016 to 2023
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BLRD VA I01 BX002905
6 · The paper itself

Abstract

Chromatin looping is key to gene regulation, yet no broadly applicable methods to selectively modify chromatin loops have been described. We have engineered a method for chromatin loop reorganization using CRISPR-dCas9 (CLOuD9) to selectively and reversibly establish chromatin loops. We demonstrate the power of this technology to selectively modulate gene expression at targeted loci.

Indexed as

Chromatin Assembly and DisassemblyCRISPR-Cas Systemsbeta-GlobinsDEAD-box RNA HelicasesHEK293 CellsHumansK562 CellsPromoter Regions, Geneticbeta-GlobinsDDX17 protein, humanDdx5 protein, humanDEAD-box RNA Helicases

Identifiers

PMID28703221
PMCPMC5511349

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.