Evidence map›Paper›PMID 28700597›Full record

ArticlePloS one2017

Differentially expressed microRNAs in diapausing versus HCl-treated Bombyx embryos.

Wentao Fan, Yangsheng Zhong, Mingyue Qin, Bimin Lin, Fangyan Chen, Huichao Yan, Wenchu Li, Jianrong Lin

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Wentao FanDepartment of sericulture, College of Animal Science, South China Agricultural University, Guangzhou, Guangdong, China.
Yangsheng ZhongDepartment of sericulture, College of Animal Science, South China Agricultural University, Guangzhou, Guangdong, China.
Mingyue QinDepartment of sericulture, College of Animal Science, South China Agricultural University, Guangzhou, Guangdong, China.
Bimin LinDepartment of sericulture, College of Animal Science, South China Agricultural University, Guangzhou, Guangdong, China.
Fangyan ChenDepartment of sericulture, College of Animal Science, South China Agricultural University, Guangzhou, Guangdong, China.
Huichao YanDepartment of sericulture, College of Animal Science, South China Agricultural University, Guangzhou, Guangdong, China.
Wenchu LiDepartment of sericulture, College of Animal Science, South China Agricultural University, Guangzhou, Guangdong, China.
Jianrong LinDepartment of sericulture, College of Animal Science, South China Agricultural University, Guangzhou, Guangdong, China.ORCID http://orcid.org/0000-0003-4641-3989
South China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Differentially expressed microRNAs were detected to explore the molecular mechanisms of diapause termination. The total small RNA of diapause-destined silkworm eggs and HCl-treated eggs was extracted and then sequenced using HiSeq high-throughput method. 44 novel miRNAs were discovered. Compared to those in the diapause-destined eggs, 61 miRNAs showed significant changes in the acid-treated eggs, with 23 being up-regulated and 38 being down-regulated. The potential target genes of differentially expressed miRNAs were predicted by miRanda. Gene Ontology and KEGG pathway enrichment analysis of these potential target genes revealed that they were mainly located within cells and organelles, involved in cellular and metabolic processes, and participated in protein production, processing and transportation. Two differentially expressed genes, Bombyx mori SDH and Bmo-miR-2761-3p, were further analyzed with qRT-PCR. BmSDH was significantly up-regulated in the HCl-treated eggs, while Bmo-miR-2761-3p was down-regulated. These results suggested that these two genes were well coordinated in silkworm eggs. Dual luciferase reporter assay demonstrated that Bmo-miR-2761-3p inhibited the expression of BmSDH.

Indexed as

AnimalsBombyxGene Expression ProfilingGene Expression Regulation, DevelopmentalGene OntologyHydrochloric AcidMicroRNAsReverse Transcriptase Polymerase Chain ReactionHydrochloric AcidMicroRNAs

Identifiers

PMID28700597
PMCPMC5507411
OpenAlexW2735060092

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.