Evidence map›Paper›PMID 28700592›Full record

ArticlePloS one2017

Genome-wide identification of gene expression in contrasting maize inbred lines under field drought conditions reveals the significance of transcription factors in drought tolerance.

Xiaojing Zhang, Xuyang Liu, Dengfeng Zhang, Huaijun Tang, Baocheng Sun, Chunhui Li, Luyang Hao, Cheng Liu, Yongxiang Li, Yunsu Shi and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
25.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Overexpression ofMolecular breeding : new strategies in plant improvement · 2023
    Article
  7. Roles of auxin pathways in maize biology.Journal of experimental botany · 2023
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Tolerance mechanisms in maize identified through phenotyping and transcriptome analysis in response to water deficit stress.Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Xiaojing ZhangInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Xuyang LiuInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Dengfeng ZhangInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Huaijun TangInstitute of Grain Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China.
Baocheng SunInstitute of Grain Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China.
Chunhui LiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Luyang HaoInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Cheng LiuInstitute of Grain Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China.
Yongxiang LiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Yunsu ShiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Xiaoqing XieInstitute of Grain Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China.
Yanchun SongInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Tianyu WangInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Yu LiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Chinese Academy of Agricultural Sciences · CNXinjiang Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drought is a major threat to maize growth and production. Understanding the molecular regulation network of drought tolerance in maize is of great importance. In this study, two maize inbred lines with contrasting drought tolerance were tested in the field under natural soil drought and well-watered conditions. In addition, the transcriptomes of their leaves was analyzed by RNA-Seq. In total, 555 and 2,558 genes were detected to specifically respond to drought in the tolerant and the sensitive line, respectively, with a more positive regulation tendency in the tolerant genotype. Furthermore, 4,700, 4,748, 4,403 and 4,288 genes showed differential expression between the two lines under moderate drought, severe drought and their well-watered controls, respectively. Transcription factors were enriched in both genotypic differentially expressed genes and specifically responsive genes of the tolerant line. It was speculated that the genotype-specific response of 20 transcription factors in the tolerance line and the sustained genotypically differential expression of 22 transcription factors might enhance tolerance to drought in maize. Our results provide new insight into maize drought tolerance-related regulation systems and provide gene resources for subsequent studies and drought tolerance improvement.

Indexed as

DroughtsStress, PhysiologicalTranscriptomeAdaptation, PhysiologicalGene Expression Regulation, PlantGenome, PlantInbreedingPlant ProteinsTranscription FactorsZea maysPlant ProteinsTranscription Factors

Identifiers

PMID28700592
PMCPMC5507481
OpenAlexW2735934063

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.