Evidence map›Paper›PMID 28699889›Full record

ArticleeLife2017

Evidence that Mediator is essential for Pol II transcription, but is not a required component of the preinitiation complex in vivo.

Natalia Petrenko, Yi Jin, Koon Ho Wong, Kevin Struhl

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. The molecular basis of transcription initiation by RNA polymerase II.Nature reviews. Molecular cell biology · 2026
    Review
  3. Scarless Genetic Engineering ofJournal of microbiology and biotechnology · 2025
    Article
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  10. Review
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  19. Repression by theeLife · 2021
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Natalia PetrenkoDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School Boston, Boston, United States.ORCID 0000-0002-2071-214X
Yi JinDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School Boston, Boston, United States.
Koon Ho WongFaculty of Health Sciences, University of Macau, Macau, China.
Kevin StruhlDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School Boston, Boston, United States.ORCID 0000-0002-4181-7856
Boston University · USUniversity of Macau · MO

Funding

MOLECULAR MECHANISMS OF YEAST TRANSCRIPTIONAL INITIATIONR01GM030186 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI STRUHL, KEVIN · 1985 to 2018
$13.6M
MECHANISMS OF YEAST TRANSCRIPTIONAL INITITATIONR37GM030186 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI STRUHL, KEVIN · 1993 to 2002
$2.1M
NIGMS NIH HHS R01 GM030186NIGMS NIH HHS R37 GM030186
6 · The paper itself

Abstract

The Mediator complex has been described as a general transcription factor, but it is unclear if it is essential for Pol II transcription and/or is a required component of the preinitiation complex (PIC) in vivo. Here, we show that depletion of individual subunits, even those essential for cell growth, causes a general but only modest decrease in transcription. In contrast, simultaneous depletion of all Mediator modules causes a drastic decrease in transcription. Depletion of head or middle subunits, but not tail subunits, causes a downstream shift in the Pol II occupancy profile, suggesting that Mediator at the core promoter inhibits promoter escape. Interestingly, a functional PIC and Pol II transcription can occur when Mediator is not detected at core promoters. These results provide strong evidence that Mediator is essential for Pol II transcription and stimulates PIC formation, but it is not a required component of the PIC in vivo.

Indexed as

Transcription, GeneticGene Knockdown TechniquesMediator ComplexRNA Polymerase IISaccharomyces cerevisiaeMediator ComplexRNA Polymerase IIchromosomesgene regulationgenesMediatorpreinitiation complexpromoterRNA polymeraseS. cerevisiaetranscription

Identifiers

PMID28699889
PMCPMC5529107
OpenAlexW2734573616

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.