Evidence map›Paper›PMID 28699015›Full record

ArticleMicrobial ecology2018

Sponge Prokaryote Communities in Taiwanese Coral Reef and Shallow Hydrothermal Vent Ecosystems.

F J R C Coelho, D F R Cleary, N C M Gomes, A R M Pólonia, Y M Huang, L-L Liu, N J de Voogd

Abstract read
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In one paragraph

Article in Microbial ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

F J R C CoelhoDepartment of Biology & CESAM, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal.
D F R ClearyDepartment of Biology & CESAM, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal.
N C M GomesDepartment of Biology & CESAM, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal.
A R M PóloniaDepartment of Biology & CESAM, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal.
Y M HuangDepartment of Marine Recreation, National Penghu University of Science and Technology, Penghu, Taiwan.
L-L LiuDepartment of Oceanography, National Sun Yet-Sen University, Kaohsiung, Taiwan.
N J de VoogdNaturalis Biodiversity Center, Leiden, the Netherlands. nicole.devoogd@naturalis.nl.
University of Aveiro · PTNational Penghu University of Science and Technology · TWNational Sun Yat-sen University · TWNaturalis Biodiversity Center · NL

Funding

CESAM UID/AMB/50017 - POCI-01-0145- FEDER-007638Fundação para a Ciência e a Tecnologia PTDC/BIA-MIC/6473/2014 - POCI-01- 0145-FEDER-016531Fundação para a Ciência e a Tecnologia SFRH/BPD/92366/2013Fundação para a Ciência e a Tecnologia (PT) PTDC/AAC-AMB/115304/2009Ministry of Science and Technology, Taiwan NSC 102-2815-C-346-010-B)
6 · The paper itself

Abstract

Previously, it was believed that the prokaryote communities of typical 'low-microbial abundance' (LMA) or 'non-symbiont harboring' sponges were merely subsets of the prokaryote plankton community. Recent research has, however, shown that these sponges are dominated by particular clades of Proteobacteria or Cyanobacteria. Here, we expand on this research and assess the composition and putative functional profiles of prokaryotic communities from LMA sponges collected in two ecosystems (coral reef and hydrothermal vent) from vicinal islands of Taiwan with distinct physicochemical conditions. Six sponge species identified as Acanthella cavernosa (Bubarida), Echinodictyum asperum, Ptilocaulis spiculifer (Axinellida), Jaspis splendens (Tetractinellida), Stylissa carteri (Scopalinida) and Suberites sp. (Suberitida) were sampled in coral reefs in the Penghu archipelago. One sponge species provisionally identified as Hymeniacidon novo spec. (Suberitida) was sampled in hydrothermal vent habitat. Each sponge was dominated by a limited set of operational taxonomic units which were similar to sequences from organisms previously obtained from other LMA sponges. There was a distinct bacterial community between sponges collected in coral reef and in hydrothermal vents. The putative functional profile revealed that the prokaryote community from sponges collected in hydrothermal vents was significantly enriched for pathways related to DNA replication and repair.

Indexed as

AnimalsBacteriaBiodiversityCoral ReefsEcosystemHydrothermal VentsPhylogenyPoriferaTaiwanArchaeaBacteriaHydrothermal ventLow microbial abundance spongesReef coral

Identifiers

PMID28699015
OpenAlexW2735477273

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.