Evidence map›Paper›PMID 28697887›Full record

ArticleJournal of molecular biology2017

Molecular Origins of the Compatibility between Glycosaminoglycans and Aβ40 Amyloid Fibrils.

Katie L Stewart, Eleri Hughes, Edwin A Yates, David A Middleton, Sheena E Radford

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Glycosaminoglycans in Neurodegenerative Diseases.Advances in experimental medicine and biology · 2021
    Review
  7. Article
  8. Amyloid structures: much more than just a cross-β fold.Current opinion in structural biology · 2020
    Review
  9. Extracellular matrix components modulate different stages in βThe Journal of biological chemistry · 2019
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. A new era for understanding amyloid structures and disease.Nature reviews. Molecular cell biology · 2018
    Review
  15. Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Katie L StewartAstbury Centre for Structural Molecular Biology, School of Molecular and Cellular Biology, University of Leeds, Leeds LS2 9JT, UK.
Eleri HughesDepartment of Chemistry, University of Lancaster, Lancaster LA1 4YB, UK.
Edwin A YatesDepartment of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool, L69 7ZB, UK.
David A MiddletonDepartment of Chemistry, University of Lancaster, Lancaster LA1 4YB, UK. Electronic address: d.middleton@lancaster.ac.uk.
Sheena E RadfordAstbury Centre for Structural Molecular Biology, School of Molecular and Cellular Biology, University of Leeds, Leeds LS2 9JT, UK. Electronic address: s.e.radford@leeds.ac.uk.
Lancaster University · GBUniversity of Leeds · GBUniversity of Liverpool · GB

Funding

Biotechnology and Biological Sciences Research CouncilEuropean Research Council 322408Wellcome Trust
6 · The paper itself

Abstract

The Aβ peptide forms extracellular plaques associated with Alzheimer's disease. In addition to protein fibrils, amyloid plaques also contain non-proteinaceous components, including glycosaminoglycans (GAGs). We have shown previously that the GAG low-molecular-weight heparin (LMWH) binds to Aβ40 fibrils with a three-fold-symmetric (3Q) morphology with higher affinity than Aβ40 fibrils in alternative structures, Aβ42 fibrils, or amyloid fibrils formed from other sequences. Solid-state NMR analysis of the GAG-3Q fibril complex revealed an interaction site at the corners of the 3Q fibril structure, but the origin of the binding specificity remained obscure. Here, using a library of short heparin polysaccharides modified at specific sites, we show that the N-sulfate or 6-O-sulfate of glucosamine, but not the 2-O-sulfate of iduronate within heparin is required for 3Q binding, indicating selectivity in the interactions of the GAG with the fibril that extends beyond general electrostatic complementarity. By creating 3Q fibrils containing point substitutions in the amino acid sequence, we also show that charged residues at the fibril three-fold apices provide the majority of the binding free energy, while charged residues elsewhere are less critical for binding. The results indicate, therefore, that LMWH binding to 3Q fibrils requires a precise molecular complementarity of the sulfate moieties on the GAG and charged residues displayed on the fibril surface. Differences in GAG binding to fibrils with distinct sequence and/or structure may thus contribute to the diverse etiology and progression of amyloid diseases.

Indexed as

AmyloidAmyloid beta-PeptidesDNA Mutational AnalysisHeparin, Low-Molecular-WeightHumansMagnetic Resonance SpectroscopyMutant ProteinsPeptide FragmentsProtein BindingAmyloidAmyloid beta-Peptidesamyloid beta-protein (1-40)Heparin, Low-Molecular-WeightMutant ProteinsPeptide FragmentsAlzheimer's diseaseamyloid fibrilsamyloid βglycosaminoglycansheparin binding

Identifiers

PMID28697887
PMCPMC5548265
OpenAlexW2734375898

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.