Evidence map›Paper›PMID 28697587›Full record

ArticleAMB Express2017

Detection of bacterial sulfatase activity through liquid- and solid-phase colony-based assays.

Hey Young Yoon, Hyung Jun Kim, Soojin Jang, Jong-In Hong

Open access · goldAbstract read
In one paragraph

Article in AMB Express, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Target Identification in Anti-Tuberculosis Drug Discovery.International journal of molecular sciences · 2023
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Hey Young YoonDepartment of Chemistry, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
Hyung Jun KimAntibacterial Resistance Research Laboratory, Department of Discovery Biology, Institute Pasteur Korea, 16 Daewangpangyo-ro 712 beon-gi, Bundang-gu, Seongnam, Gyeonggi-do, 13488, Republic of Korea.
Soojin JangAntibacterial Resistance Research Laboratory, Department of Discovery Biology, Institute Pasteur Korea, 16 Daewangpangyo-ro 712 beon-gi, Bundang-gu, Seongnam, Gyeonggi-do, 13488, Republic of Korea.
Jong-In HongDepartment of Chemistry, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea. jihong@snu.ac.kr.
Institut Pasteur Korea · KRSeoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial arylsulfatases are crucial to biosynthesis in many microorganisms, as bacteria often utilize aryl sulfates as a source of sulfur. The bacterial sulfatases are associated with pathogenesis and are applied in many areas such as industry and agriculture. We developed an activity-based probe 1 for detection of bacterial sulfatase activity through liquid- and solid-phase colony-based assays. Probe 1 is hydrolyzed by sulfatase to generate fluorescent N-methyl isoindole, which is polymerized to form colored precipitates. These fluorescent and colorimetric properties of probe 1 induced upon treatment of sulfatases were successfully utilized for liquid-phase sulfatase activity assays for colonies and lysates of Klebsiella aerogenes, Mycobacterium avium and Mycobacterium smegmatis. In addition, probe 1 allowed solid-phase colony-based assays of K. aerogenes through the formation of insoluble colored precipitates, thus enabling accurate staining of target colonies under heterogeneous conditions.

Indexed as

Activity-based probeBacterial sulfataseColony-based assayLiquid-phase assayN-methyl isoindoleSolid-phase assay

Identifiers

PMID28697587
PMCPMC5503846
OpenAlexW2735816918

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.