Evidence map›Paper›PMID 28696922›Full record

ArticleG3 (Bethesda, Md.)2017

Functional Profiling of Transcription Factor Genes in

Alexander J Carrillo, Patrick Schacht, Ilva E Cabrera, Johnathon Blahut, Loren Prudhomme, Sarah Dietrich, Thomas Bekman, Jennifer Mei, Cristian Carrera, Vivian Chen and 8 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 76 citations in OpenAlex.

  1. DNA methylation is associated with phenotypic divergence between the dermatophytes Trichophyton rubrum and Trichophyton violaceum.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
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  8. MaAzaR, a ZnJournal of fungi (Basel, Switzerland) · 2024
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  11. Review
  12. Biology · 2022
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  19. TheFrontiers in fungal biology · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 3 countries.

Alexander J CarrilloDepartment of Plant Pathology and Microbiology.
Patrick SchachtDepartment of Plant Pathology and Microbiology.
Ilva E CabreraDepartment of Plant Pathology and Microbiology.
Johnathon BlahutCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Loren PrudhommeCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Sarah DietrichDepartment of Plant Pathology and Microbiology.
Thomas BekmanDepartment of Plant Pathology and Microbiology.
Jennifer MeiCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Cristian CarreraCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Vivian ChenCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Isaiah ClarkCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Gerardo FierroCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Logan GanzenCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Jose OrellanaCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Shelby WiseCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Kevin YangCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Hui ZhongCollege of Natural and Agricultural Sciences, University of California, Riverside, California 92521.
Katherine A BorkovichDepartment of Plant Pathology and Microbiology, Katherine.Borkovich@ucr.edu.ORCID 0000-0002-1112-6034
University of California, Riverside · USInstitut thématique Génétique, génomique et bioinformatique · FRCzech Academy of Sciences, Institute of Microbiology · CZ

Funding

Tools for Functional Analysis and Cell BiologyP01GM068087 · NIGMS · DARTMOUTH COLLEGE · PI DUNLAP, JAY C. · 2004 to 2013
$19.3M
NIGMS NIH HHS P01 GM068087
6 · The paper itself

Abstract

Regulation of gene expression by DNA-binding transcription factors is essential for proper control of growth and development in all organisms. In this study, we annotate and characterize growth and developmental phenotypes for transcription factor genes in the model filamentous fungus

Indexed as

Gene Expression ProfilingComputational BiologyFungal ProteinsGenetic Association StudiesGenome, FungalGenomicsMolecular Sequence AnnotationMutationNeurospora crassaPhenotypeTranscription FactorsTranscriptomeFungal ProteinsTranscription Factorsfilamentous fungifunctional genomicsgene knockoutstranscriptional profilingtranscription factors

Identifiers

PMID28696922
PMCPMC5592922
OpenAlexW2734490137

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.