Evidence map›Paper›PMID 28696227›Full record

ArticleThe Journal of cell biology2017

Translational regulation of viral secretory proteins by the 5' coding regions and a viral RNA-binding protein.

Johan Nordholm, Jeanne Petitou, Henrik Östbye, Diogo V da Silva, Dan Dou, Hao Wang, Robert Daniels

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Johan NordholmDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.ORCID 0000-0002-5864-8489
Jeanne PetitouDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.ORCID 0000-0001-5541-9798
Henrik ÖstbyeDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.ORCID 0000-0003-4354-2996
Diogo V da SilvaDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.
Dan DouDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.
Hao WangDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.
Robert DanielsDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.ORCID 0000-0002-5988-2920
Stockholm University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A primary function of 5' regions in many secretory protein mRNAs is to encode an endoplasmic reticulum (ER) targeting sequence. In this study, we show how the regions coding for the ER-targeting sequences of the influenza glycoproteins NA and HA also function as translational regulatory elements that are controlled by the viral RNA-binding protein (RBP) NS1. The translational increase depends on the nucleotide composition and 5' positioning of the ER-targeting sequence coding regions and is facilitated by the RNA-binding domain of NS1, which can associate with ER membranes. Inserting the ER-targeting sequence coding region of NA into different 5' UTRs confirmed that NS1 can promote the translation of secretory protein mRNAs based on the nucleotides within this region rather than the resulting amino acids. By analyzing human protein mRNA sequences, we found evidence that this mechanism of using 5' coding regions and particular RBPs to achieve gene-specific regulation may extend to human-secreted proteins.

Indexed as

3' Untranslated Regions5' Untranslated RegionsA549 CellsAnimalsBinding SitesChlorocebus aethiopsCOS CellsEndoplasmic ReticulumHEK293 CellsHeLa CellsHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza A Virus, H1N1 SubtypeNeuraminidaseProtein BindingProtein Biosynthesis3' Untranslated Regions5' Untranslated RegionsH1N1 virus hemagglutininHemagglutinin Glycoproteins, Influenza VirusINS1 protein, influenza virusNA protein, influenza A virusNeuraminidaseRNA, MessengerRNA, ViralSignal Recognition ParticleViral Nonstructural ProteinsViral Proteins

Identifiers

PMID28696227
PMCPMC5551715
OpenAlexW2734494411

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.