Evidence map›Paper›PMID 28694323›Full record

ArticleEMBO molecular medicine2017

A single mutation in Taiwanese H6N1 influenza hemagglutinin switches binding to human-type receptors.

Robert P de Vries, Netanel Tzarum, Wenjie Peng, Andrew J Thompson, Iresha N Ambepitiya Wickramasinghe, Alba T Torrents de la Pena, Marielle J van Breemen, Kim M Bouwman, Xueyong Zhu, Ryan McBride and 5 more

Open access · goldAbstract read
In one paragraph

Article in EMBO molecular medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 50 citations in OpenAlex.

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  14. Journal of virology · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Robert P de VriesDepartments of Molecular Medicine & Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, USA.
Netanel TzarumDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, The Scripps Research Institute, La Jolla, CA, USA.
Wenjie PengDepartments of Molecular Medicine & Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, USA.
Andrew J ThompsonDepartments of Molecular Medicine & Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, USA.
Iresha N Ambepitiya WickramasinghePathology Division, Department of Pathobiology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.
Alba T Torrents de la PenaDepartment of Medical Microbiology, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Marielle J van BreemenDepartment of Medical Microbiology, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Kim M BouwmanPathology Division, Department of Pathobiology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.
Xueyong ZhuDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, The Scripps Research Institute, La Jolla, CA, USA.
Ryan McBrideDepartments of Molecular Medicine & Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, USA.
Wenli YuDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, The Scripps Research Institute, La Jolla, CA, USA.
Rogier W SandersDepartment of Medical Microbiology, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Monique H VerheijePathology Division, Department of Pathobiology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.
Ian A WilsonDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, The Scripps Research Institute, La Jolla, CA, USA wilson@scripps.edu jpaulson@scripps.edu.ORCID 0000-0002-6469-2419
James C PaulsonDepartments of Molecular Medicine & Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, USA wilson@scripps.edu jpaulson@scripps.edu.ORCID 0000-0003-4589-5322
Scripps Research Institute · USUtrecht University · NLAmsterdam UMC Location University of Amsterdam · NLCornell University · US

Funding

Structural Basis of Immune Recognition of Glycosylated AntigensU54GM062116 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ORR, SALLY L · 2001 to 2010
$80.3M
ZWITTERION SURFACTANT DDMAB FOR IMPROV STABIL OF PROTEINP41RR001209 · NCRR · STANFORD UNIVERSITY · PI REESE, MICHAEL LLOYD · 1985 to 2011
$38.9M
X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Influenza virus receptors on human airway epithelial cellsR01AI114730 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI PAULSON, JAMES C · 2015 to 2023
$5.1M
Exploiting sites of vulnerability on influenza virusesR56AI117675 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 2015 to 2015
$836k
Exploiting Vulnerability on Influenza VirusR56AI127371 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 2017 to 2017
$730k
European Research Council 280829NCRR NIH HHS P41 RR001209NIAID NIH HHS R01 AI114730NIAID NIH HHS R56 AI117675NIAID NIH HHS R56 AI127371NIGMS NIH HHS P41 GM103393NIGMS NIH HHS U54 GM062116
6 · The paper itself

Abstract

In June 2013, the first case of human infection with an avian H6N1 virus was reported in a Taiwanese woman. Although this was a single non-fatal case, the virus continues to circulate in Taiwanese poultry. As with any emerging avian virus that infects humans, there is concern that acquisition of human-type receptor specificity could enable transmission in the human population. Despite mutations in the receptor-binding pocket of the human H6N1 isolate, it has retained avian-type (NeuAcα2-3Gal) receptor specificity. However, we show here that a single nucleotide substitution, resulting in a change from Gly to Asp at position 225 (G225D), completely switches specificity to human-type (NeuAcα2-6Gal) receptors. Significantly, G225D H6 loses binding to chicken trachea epithelium and is now able to bind to human tracheal tissue. Structural analysis reveals that Asp225 directly interacts with the penultimate Gal of the human-type receptor, stabilizing human receptor binding.

Indexed as

Point MutationAnimalsChickensHemagglutinin Glycoproteins, Influenza VirusHemagglutininsHumansInfluenza A virusInfluenza, HumanInfluenza in BirdsPoultry DiseasesProtein BindingReceptors, VirusTaiwanhemagglutinin, avian influenza A virusHemagglutinin Glycoproteins, Influenza VirusHemagglutininsReceptors, Virusglycan arrayhemagglutinininfluenza A virussialic acidX‐ray crystallography

Identifiers

PMID28694323
PMCPMC5582370
OpenAlexW2735426686

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.