Evidence map›Paper›PMID 28694137›Full record

ArticleClinical immunology (Orlando, Fla.)2017

Idiopathic T cell lymphopenia identified in New York State Newborn Screening.

Stephanie Albin-Leeds, Juliana Ochoa, Harshna Mehta, Beth H Vogel, Michele Caggana, Vincent Bonagura, Heather Lehman, Mark Ballow, Arye Rubinstein, Subhadra Siegel and 3 more

Open access · greenAbstract read
In one paragraph

Article in Clinical immunology (Orlando, Fla.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. TREC Screening for WHIM Syndrome.Journal of clinical immunology · 2021
    Article
  8. Article
  9. SCID newborn screening: What we've learned.The Journal of allergy and clinical immunology · 2021
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Abnormal Newborn Screen in a WHIM Syndrome Infant.Journal of clinical immunology · 2019
    Article
  15. Article
  16. Newborn Screening for Severe Combined Immunodeficiency.Current allergy and asthma reports · 2018
    Review
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 1 country.

Stephanie Albin-LeedsDivision of Clinical Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
Juliana OchoaDivision of Clinical Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
Harshna MehtaDivision of Clinical Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
Beth H VogelWadsworth Center, New York State Department of Health, Albany, NY, United States.
Michele CagganaWadsworth Center, New York State Department of Health, Albany, NY, United States.
Vincent BonaguraDivision of Allergy, Asthma and Immunology, Northwell Health System, Great Neck, NY, United States.
Heather LehmanDivision of Allergy, Immunology, and Pediatric Rheumatology, Women and Children's Hospital of Buffalo, Buffalo, NY, United States.
Mark BallowDivision of Allergy, Immunology, and Pediatric Rheumatology, Women and Children's Hospital of Buffalo, Buffalo, NY, United States.
Arye RubinsteinDivision of Allergy and Immunology, Montefiore Hospital Medical Center, Bronx, NY, United States.
Subhadra SiegelDepartment of Pediatrics, New York Medical College, Valhalla, NY, United States.
Leonard WeinerDepartment of Pediatrics, State University of New York Upstate Medical University, Syracuse, NY, United States.
Geoffrey A WeinbergUniversity of Rochester, School of Medicine & Dentistry, United States.
Charlotte Cunningham-RundlesDivision of Clinical Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, United States. Electronic address: charlotte.cunningham-rundles@mssm.edu.
Icahn School of Medicine at Mount Sinai · USNew York State Department of Health · USWomen & Children's Hospital of Buffalo · USMontefiore Medical Center · USNew York Medical College · USNorthwell Health · USSUNY Upstate Medical University · USUniversity of Rochester · US

Funding

Regulation of IgA class switching in the intestinal mucosaP01AI061093 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2004 to 2021
$29.8M
Resources to Assist Investigations in Primary Immunodeficiency Diseases (U24)U24AI086037 · NIAID · IMMUNE DEFICIENCY FOUNDATION · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2010 to 2019
$6.5M
TARGETING PRIMARY IMMUNODEFICIENCY AMONG MINORITIESR18AI048693 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2000 to 2016
$6.2M
Exposporium determinants of Bacillus anthracisR21AI101093 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI STEWART, GEORGE C. · 2012 to 2013
$390k
Primary Immune Deficiency Consortium ConferenceR13AI069762 · NIAID · CLINICAL IMMUNOLOGY SOCIETY · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2006 to 2008
$75k
Primary Immunodeficiency Diseases Consortium ConferenceR13AI082823 · NIAID · CLINICAL IMMUNOLOGY SOCIETY · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2009 to 2009
$13k
NIAID NIH HHS P01 AI061093NIAID NIH HHS R13 AI069762NIAID NIH HHS R13 AI082823NIAID NIH HHS R18 AI048693NIAID NIH HHS R21 AI101093NIAID NIH HHS U24 AI086037
6 · The paper itself

Abstract

Quantification of T-cell receptor excision circles (TRECs) for newborn screening for SCID has advanced the diagnosis of severe combined immune deficiency (SCID). However, it has led to the identification of infants with T cell lymphopenia without known cause. The clinical characteristics, appropriate laboratory monitoring, and outcomes of patients remain unclear. We performed a retrospective review of clinical and laboratory studies for 26 infants collected from 7 New York State referral centers from 2010 to 2016 with low TRECs (mean, 70copies/μl) and subnormal CD3 counts (mean, 1150/cubicmm). Over time absolute CD3 counts increased in 17 and decreased in 9; 22 (85%) have done well clinically regardless of absolute T cell values. Additional infants with TCL will continue to be identified in newborn screening panels. While most patients seem to do well clinically, parameters for diagnosis and monitoring have yet to be formalized, and additional information needs to be collected, causes and outcomes reported.

Indexed as

CD3 ComplexDNAFemaleFollow-Up StudiesGene Rearrangement, T-LymphocyteHumansInfant, NewbornLymphocyte CountLymphopeniaMaleNeonatal ScreeningNew YorkReceptors, Antigen, T-CellRetrospective StudiesSevere Combined ImmunodeficiencyT-LymphocytesCD3 ComplexDNAReceptors, Antigen, T-CellIdiopathic T-cell lymphopeniaNewborn screeningSevere combined immunodeficiencyTREC level

Identifiers

PMID28694137
PMCPMC5736366
OpenAlexW2725829692

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.