Evidence map›Paper›PMID 28693420›Full record

ArticleBMC plant biology2017

Differential proteomic analysis of replanted Rehmannia glutinosa roots by iTRAQ reveals molecular mechanisms for formation of replant disease.

Mingjie Li, Yanhui Yang, Fajie Feng, Bao Zhang, Shuqiang Chen, Chuyun Yang, Li Gu, Fengqing Wang, Junyi Zhang, Aiguo Chen and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
6.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Plant stress and proteomics in medicinal plants.Frontiers in plant science · 2025
    Review
  3. Plants (Basel, Switzerland) · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Functional analysis ofFrontiers in plant science · 2022
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Plants (Basel, Switzerland) · 2020
    Article
  18. International journal of molecular sciences · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Mingjie LiCollege of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Yanhui YangCollege of Bioengineering, Henan University of Technology, Zhengzhou, China.
Fajie FengCollege of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Bao ZhangCollege of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Shuqiang ChenCollege of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Chuyun YangCollege of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Li GuCollege of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Fengqing WangHenan Agricultural University, Zhengzhou, China.
Junyi ZhangCollege of Chemical Engineering, Huaqiao University, Xiamen, China.
Aiguo ChenCollege of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Wenxiong LinCollege of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou, China.
Xinjian ChenHenan Agricultural University, Zhengzhou, China. xinjian1@yahoo.com.
Zhongyi ZhangCollege of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou, China. zyzhang@fafu.edu.cn.
Fujian Agriculture and Forestry University · CNHenan Agricultural University · CNHenan University of Technology · CNHuaqiao University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe normal growth of Rehmannia glutinosa, a widely used medicinal plant in China, is severely disturbed by replant disease. The formation of replant disease commonly involves interactions among plants, allelochemicals and microbes; however, these relationships remain largely unclear. As a result, no effective measures are currently available to treat replant disease.

resultsIn this study, an integrated R. glutinosa transcriptome was constructed, from which an R. glutinosa protein library was obtained. iTRAQ technology was then used to investigate changes in the proteins in replanted R. glutinosa roots, and the proteins that were expressed in response to replant disease were identified. An integrated R. glutinosa transcriptome from different developmental stages of replanted and normal-growth R. glutinosa produced 65,659 transcripts, which were accurately translated into 47,818 proteins. Using this resource, a set of 189 proteins was found to be significantly differentially expressed between normal-growth and replanted R. glutinosa. Of the proteins that were significantly upregulated in replanted R. glutinosa, most were related to metabolism, immune responses, ROS generation, programmed cell death, ER stress, and lignin synthesis.

conclusionsBy integrating these key events and the results of previous studies on replant disease formation, a new picture of the damaging mechanisms that cause replant disease stress emerged. Replant disease altered the metabolic balance of R. glutinosa, activated immune defence systems, increased levels of ROS and antioxidant enzymes, and initiated the processes of cell death and senescence in replanted R. glutinosa. Additionally, lignin deposition in R. glutinosa roots that was caused by replanting significantly inhibited tuberous root formation. These key processes provide important insights into the underlying mechanisms leading to the formation of replant disease and also for the subsequent development of new control measures to improve production and quality of replanted plants.

Indexed as

Stress, PhysiologicalTranscriptomePlant RootsProteomicsRehmanniaiTRAQMolecular mechanismProteinsReplant diseaseR. glutinosaTranscriptome

Identifiers

PMID28693420
PMCPMC5504617
OpenAlexW2725693644

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.