Evidence map›Paper›PMID 28692692›Full record

ArticlePLoS neglected tropical diseases2017

Geographic strain differentiation of Schistosoma japonicum in the Philippines using microsatellite markers.

Kharleezelle J Moendeg, Jose Ma M Angeles, Ryo Nakao, Lydia R Leonardo, Ian Kendrich C Fontanilla, Yasuyuki Goto, Masashi Kirinoki, Elena A Villacorte, Pilarita T Rivera, Noboru Inoue and 2 more

Abstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Global scenario of genetic diversity inParasite epidemiology and control · 2024
    Article
  9. Article
  10. Article
  11. ACG case reports journal · 2021
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kharleezelle J MoendegNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido, Japan.
Jose Ma M AngelesNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido, Japan.
Ryo NakaoLaboratory of Parasitology, Department of Disease Control, Graduate School of Veterinary Medicine, Hokkaido University, Sapporo, Hokkaido, Japan.
Lydia R LeonardoDepartment of Parasitology, College of Public Health, University of the Philippines Manila, Philippines.
Ian Kendrich C FontanillaInstitute of Biology, University of the Philippines Diliman, Quezon City, Manila, Philippines.
Yasuyuki GotoLaboratory of Molecular Immunology, Department of Animal Resource Sciences, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Masashi KirinokiDepartment of Tropical Medicine and Parasitology, Dokkyo Medical University School of Medicine, Tochigi, Japan.
Elena A VillacorteDepartment of Parasitology, College of Public Health, University of the Philippines Manila, Philippines.
Pilarita T RiveraDepartment of Parasitology, College of Public Health, University of the Philippines Manila, Philippines.
Noboru InoueNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido, Japan.
Yuichi ChigusaDepartment of Tropical Medicine and Parasitology, Dokkyo Medical University School of Medicine, Tochigi, Japan.
Shin-Ichiro KawazuNational Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido, Japan.ORCID http://orcid.org/0000-0003-4326-4025

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMicrosatellites have been found to be useful in determining genetic diversities of various medically-important parasites which can be used as basis for an effective disease management and control program. In Asia and Africa, the identification of different geographical strains of Schistosoma japonicum, S. haematobium and S. mansoni as determined through microsatellites could pave the way for a better understanding of the transmission epidemiology of the parasite. Thus, the present study aims to apply microsatellite markers in analyzing the populations of S. japonicum from different endemic areas in the Philippines for possible strain differentiation. METHODOLOGY/ PRINCIPAL

findingsExperimental mice were infected using the cercariae of S. japonicum collected from infected Oncomelania hupensis quadrasi snails in seven endemic municipalities. Adult worms were harvested from infected mice after 45 days of infection and their DNA analyzed against ten previously characterized microsatellite loci. High genetic diversity was observed in areas with high endemicity. The degree of genetic differentiation of the parasite population between endemic areas varies. Geographical separation was considered as one of the factors accounting for the observed difference between populations. Two subgroups have been observed in one of the study sites, suggesting that co-infection with several genotypes of the parasite might be present in the population. Clustering analysis showed no particular spatial structuring between parasite populations from different endemic areas. This result could possibly suggest varying degrees of effects of the ongoing control programs and the existing gene flow in the populations, which might be attributed to migration and active movement of infected hosts from one endemic area to another. CONCLUSIONS/ SIGNIFICANCE: Based on the results of the study, it is reasonable to conclude that genetic diversity could be one possible criterion to assess the infection status in highly endemic areas. Genetic surveillance using microsatellites is therefore important to predict the ongoing gene flow and degree of genetic diversity, which indirectly reflects the success of the control program in schistosomiasis-endemic areas.

Indexed as

Microsatellite RepeatsAnimalsCercariaCoinfectionFemaleGenetic VariationGenotypeGeographyHumansMaleMiceMice, Inbred BALB CPhilippinesSchistosoma japonicumSchistosomiasis japonicaSnails

Identifiers

PMID28692692
PMCPMC5519200

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.