Evidence map›Paper›PMID 28688048›Full record

ArticleMolecular genetics and genomics : MGG2017

Susceptibility background for type 2 diabetes in eleven Mexican Indigenous populations: HNF4A gene analysis.

M A Granados-Silvestre, M G Ortiz-López, J Granados, S Canizales-Quinteros, Rosenda I Peñaloza-Espinosa, C Lechuga, V Acuña-Alonzo, K Sánchez-Pozos, M Menjivar

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Maturity Onset Diabetes of the Young-New Approaches for Disease Modelling.International journal of molecular sciences · 2021
    Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 1 country.

M A Granados-SilvestreDepartamento de Biología, Facultad de Química, Universidad Nacional Autónoma de México, Edif. F, 2o piso, Lab. 202, Av Universidad 3000, Circuito Interior S/N, Coyoacán, Cd. Universitaria, CP 04510, Mexico City, Mexico.
M G Ortiz-LópezDepartamento de Biología, Facultad de Química, Universidad Nacional Autónoma de México, Edif. F, 2o piso, Lab. 202, Av Universidad 3000, Circuito Interior S/N, Coyoacán, Cd. Universitaria, CP 04510, Mexico City, Mexico.
J GranadosDepartamento de Trasplantes, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, Vasco de Quiroga 15, Belisario Domínguez, Belisario Domínguez Secc 16, CP 14080, Mexico City, Mexico.
S Canizales-QuinterosDepartamento de Biología, Facultad de Química, Universidad Nacional Autónoma de México, Edif. F, 2o piso, Lab. 202, Av Universidad 3000, Circuito Interior S/N, Coyoacán, Cd. Universitaria, CP 04510, Mexico City, Mexico.
Rosenda I Peñaloza-EspinosaUnidad de Investigación Médica en Genética Humana, Centro Médico Nacional, Siglo XXI, Instituto Mexicano del Seguro Social (IMSS), Av. Cuauhtémoc 300, Cuauhtémoc, CP 06720, Mexico City, Mexico.
C LechugaCentro Cultural Universitario "Casa de las Diligencias", Universidad Autónoma del Estado de México, Av Benito Juárez Garcia Sur 114, Centro, CP 50000, Toluca, Mexico State, Mexico.
V Acuña-AlonzoEscuela Nacional de Antropología e Historia, Instituto Nacional de Antropología e Historia, Mexico City, Mexico.
K Sánchez-PozosDepartamento de Biología, Facultad de Química, Universidad Nacional Autónoma de México, Edif. F, 2o piso, Lab. 202, Av Universidad 3000, Circuito Interior S/N, Coyoacán, Cd. Universitaria, CP 04510, Mexico City, Mexico.
M MenjivarDepartamento de Biología, Facultad de Química, Universidad Nacional Autónoma de México, Edif. F, 2o piso, Lab. 202, Av Universidad 3000, Circuito Interior S/N, Coyoacán, Cd. Universitaria, CP 04510, Mexico City, Mexico. menjivar@unam.mx.
Universidad Nacional Autónoma de México · MXHospital Juárez de México · MXInstituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXMexican Social Security Institute · MXNational Institute of Anthropology and History · MXNational Institute of Genomic Medicine · MXUniversidad Autónoma del Estado de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic risk of developing type 2 diabetes (T2D) increases in parallel with the proportion of Native American ancestry. Mestizo Mexicans have a 70% Native Amerindian genetic background. The T130I polymorphism in the HNF4A gene has been associated with early-onset T2D in mestizo Mexicans. Thus, the aim of the present study was to evaluate the frequency and relationship of the T130I variant in the HNF4A gene with risk factors for developing T2D in eleven indigenous groups from Mexico. In two groups, all exons of the HNF4A gene were directly sequenced; in the remaining the T130I polymorphism was analyzed by restriction fragment length polymorphism. Ancestry informative markers were assessed to confirm the Amerindian component. An additional analysis of EHH was carried out. Interestingly, HNF4A gene screening revealed only the presence of the T130I polymorphism. The range frequency of the risk allele (T) in the indigenous groups was from 2.7 to 16%. Genotypic frequencies (T130I/I130I) were higher and significantly different from those of all of the populations included in the HapMap Project (P < 0.005). EHH scores suggest a positive selection for T130I polymorphism. Metabolic traits indicate a relationship between the T130I/I130I genotypes with high triglyceride concentrations in the indigenous groups (P < 0.005). These results strongly suggest that the high frequency of the T130I polymorphism and its biological relationship with dysfunction in lipid metabolism in Mexican indigenous groups is a risk factor for the developing of T2D in Mexicans.

Indexed as

Genetic Predisposition to DiseaseCross-Sectional StudiesDiabetes Mellitus, Type 2EthnicityHaplotypesHepatocyte Nuclear Factor 4HumansMexicoPolymorphism, Restriction Fragment LengthPolymorphism, Single NucleotideHepatocyte Nuclear Factor 4HNF4A protein, humanDiabetes backgroundHNF4A geneMexican indigenousT130I polymorphism

Identifiers

PMID28688048
OpenAlexW2728132440

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.