Evidence map›Paper›PMID 28687974›Full record

ArticleNeurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology2017

SYNE1 related cerebellar ataxia presents with variable phenotypes in a consanguineous family from Turkey.

E Yucesan, Sibel A Ugur Iseri, B Bilgic, Z Gormez, B Bakir Gungor, A Sarac, O Ozdemir, M Sagiroglu, H Gurvit, H Hanagasi and 1 more

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In one paragraph

Article in Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. News on the journal Neurological Sciences in 2017.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2018
    Article
  6. IdentifyingFrontiers in neurology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

E YucesanDepartment of Genetics, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Istanbul, Turkey.
Sibel A Ugur IseriDepartment of Genetics, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Istanbul, Turkey. sibel.ugur@istanbul.edu.tr.ORCID http://orcid.org/0000-0002-5790-6853
B BilgicBehavioral Neurology and Movement Disorders Unit, Department of Neurology, Istanbul Faculty of Medicine, Istanbul University, Istanbul, Turkey.
Z GormezAdvanced Genomics and Bioinformatics Research Center (IGBAM), BILGEM, TUBITAK, Kocaeli, Turkey.
B Bakir GungorAdvanced Genomics and Bioinformatics Research Center (IGBAM), BILGEM, TUBITAK, Kocaeli, Turkey.
A SaracAdvanced Genomics and Bioinformatics Research Center (IGBAM), BILGEM, TUBITAK, Kocaeli, Turkey.
O OzdemirDepartment of Genetics, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Istanbul, Turkey.
M SagirogluAdvanced Genomics and Bioinformatics Research Center (IGBAM), BILGEM, TUBITAK, Kocaeli, Turkey.
H GurvitBehavioral Neurology and Movement Disorders Unit, Department of Neurology, Istanbul Faculty of Medicine, Istanbul University, Istanbul, Turkey.
H HanagasiBehavioral Neurology and Movement Disorders Unit, Department of Neurology, Istanbul Faculty of Medicine, Istanbul University, Istanbul, Turkey.
U OzbekDepartment of Genetics, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Istanbul, Turkey.
Istanbul University · TRTUBITAK BILGEM · TRBezmiâlem Vakıf Üniversitesi · TRIstanbul Kültür University · TRIstinye University · TRScientific and Technological Research Council of Turkey · TR

Funding

Istanbul Development Agency TR10/15/YNK/0093Scientific Research Projects Coordination Unit of Istanbul University ONAP-11021The Republic of Turkey Ministry of Development Infrastructure Grant-2011K120020The Scientific and Technological Research Council of Turkey (TUBITAK) 113S331The Scientific and Technological Research Council of Turkey (TUBITAK) UEKAE, BILGEM K030-T439
6 · The paper itself

Abstract

SYNE1 related autosomal recessive cerebellar ataxia type 1 (ARCA1) is a late-onset cerebellar ataxia with slow progression originally demonstrated in French-Canadian populations of Quebec, Canada. Nevertheless, recent studies on SYNE1 ataxia have conveyed the condition from a geographically limited pure cerebellar recessive ataxia to a complex multisystem phenotype that is relatively common on the global scale. To determine the underlying genetic cause of the ataxia phenotype in a consanguineous family from Turkey presenting with very slow progressive cerebellar symptoms including dysarthria, dysmetria, and gait ataxia, we performed SNP-based linkage analysis in the family along with whole exome sequencing (WES) in two affected siblings. We identified a homozygous variant in SYNE1 (NM_033071.3: c.13086delC; p.His4362GlnfsX2) in all four affected siblings. This variant presented herein has originally been associated with only pure ataxia in a single case. We thus present segregation and phenotypic manifestations of this variant in four affected family members and further extend the pure ataxia phenotype with upper motor neuron involvement and peripheral neuropathy. Our findings in turn established a precise molecular diagnosis in this family, demonstrating the use of WES combined with linkage analysis in families as a powerful tool for establishing a quick and precise genetic diagnosis of complex neurological phenotypes.

Indexed as

AdultCerebellar AtaxiaConsanguinityCytoskeletal ProteinsDiagnosis, DifferentialFemaleHumansMaleNerve Tissue ProteinsNuclear ProteinsPhenotypeSiblingsTurkeyCytoskeletal ProteinsNerve Tissue ProteinsNuclear ProteinsSYNE1 protein, humanAutosomal recessive cerebellar ataxiaE. Yucesan and S. A. Ugur Iseri contributed equally to this work.Linkage analysisPeripheral neuropathySYNE1Whole exome sequencing

Identifiers

PMID28687974
OpenAlexW2724966365

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.