ArticleScientific reports2017
Evolution of the Araliaceae family inferred from complete chloroplast genomes and 45S nrDNAs of 10 Panax-related species.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.
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40 citing papers in PubMed, 1 synthesis or guideline pooled it, 78 citations in OpenAlex.
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- The complete chloroplast genome ofFrontiers in genetics · 2026Article
- PCR-Based Molecular Authentication Method for Sources of Agrimoniae Herba via Comparative Analyses of Complete Chloroplast Genomes.International journal of molecular sciences · 2025Article
- Extensive nrDNA Polymorphism inPlants (Basel, Switzerland) · 2025Article
- De Novo assembly and phylogenetic analysis of the complete mitochondrial genome of Eleutherococcus senticosus and related araliaceous species.BMC plant biology · 2025Article
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- Comparative analysis of chloroplast genomes of seven Juniperus species from Kazakhstan.PloS one · 2024Article
- Evolution of the Araliaceae family involved rapid diversification of the Asian Palmate group and Hydrocotyle specific mutational pressure.Scientific reports · 2023Article
- New Insights into Phylogenetic Relationship ofInternational journal of molecular sciences · 2023Article
- The complete chloroplast genome of Ulmus mianzhuensis with insights into structural variations, adaptive evolution, and phylogenetic relationships of Ulmus (Ulmaceae).BMC genomics · 2023Article
- The Complete Chloroplast Genomes ofGenes · 2023Article
- The first report describes features of the chloroplast genome ofSaudi journal of biological sciences · 2023Article
- Comparative transcriptome and metabolome analyses of fourJournal of ginseng research · 2023Article
- High-throughput discovery of plastid genes causing albino phenotypes in ornamental chimeric plants.Horticulture research · 2023Article
- Deletion and tandem duplications of biosynthetic genes drive the diversity of triterpenoids in Aralia elata.Nature communications · 2022Article
- Comparative Analysis and Phylogenetic Relationships ofBiology · 2022Article
- Genome structure and diversity among Cynanchum wilfordii accessions.BMC plant biology · 2022Article
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Authors and funding
7 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We produced complete sequences and conducted comparative analysis of the maternally inherited chloroplast (cp) genomes and bi-parentally inherited 45S nuclear ribosomal RNA genes (nrDNA) from ten Araliaceae species to elucidate the genetic diversity and evolution in that family. The cp genomes ranged from 155,993 bp to 156,730 bp with 97.1-99.6% similarity. Complete 45S nrDNA units were about 11 kb including a 5.8-kb 45S cistron. Among 79 cp protein-coding genes, 74 showed nucleotide variations among ten species, of which infA, rpl22, rps19 and ndhE genes showed the highest Ks values and atpF, atpE, ycf2 and rps15 genes showed the highest Ka/Ks values. Four genes, petN, psaJ, psbF, and psbN, related to photosynthesis and one gene, rpl23, related to the ribosomal large subunit remain conserved in all 10 Araliaceae species. Phylogenetic analysis revealed that the ten species could be resolved into two monophyletic lineages, the Panax-Aralia and the Eleutherococcus-Dendropanax groups, which diverged approximately 8.81-10.59 million years ago (MYA). The Panax genus divided into two groups, with diploid species including P. notoginseng, P. vietnamensis, and P. japonicus surviving in Southern Asia and a tetraploid group including P. ginseng and P. quinquefolius Northern Asia and North America 2.89-3.20 MYA.
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