Evidence map›Paper›PMID 28686870›Full record

ArticleCell stem cell2017

Intestinal Enteroendocrine Lineage Cells Possess Homeostatic and Injury-Inducible Stem Cell Activity.

Kelley S Yan, Olivier Gevaert, Grace X Y Zheng, Benedict Anchang, Christopher S Probert, Kathryn A Larkin, Paige S Davies, Zhuan-Fen Cheng, John S Kaddis, Arnold Han and 36 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell stem cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 231 papers.

0numbers the graph read from it
0cells of the map it votes in
231citing papers in PubMed
20.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

231 citing papers in PubMed, 361 citations in OpenAlex.

  1. Stemness in Colon Cancer.Methods in molecular biology (Clifton, N.J.) · 2027
    Article
  2. Article
  3. Building and regenerating intestines by manipulating intestinal stem cells.Nature reviews. Gastroenterology & hepatology · 2026
    Review
  4. Review
  5. Article
  6. Fasting primes small intestinal regeneration after damage via a microbiome-metabolite-chromatin axis.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  20. Article

171 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

46 authors at 13 institutions in 1 country.

Kelley S YanDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA; Columbia Center for Human Development, Columbia Stem Cell Initiative, Department of Medicine, Division of Digestive and Liver Diseases, Department of Genetics and Development, Columbia University Medical Center, New York, NY 10032, USA.
Olivier GevaertDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
Grace X Y Zheng10x Genomics, Inc., Pleasanton, CA 94566, USA.
Benedict AnchangDepartment of Radiology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Christopher S ProbertDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Kathryn A LarkinDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
Paige S DaviesOregon Health & Science University, Department of Cell, Developmental and Cancer Biology, Portland, OR 97239, USA.
Zhuan-Fen ChengDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
John S KaddisDepartment of Diabetes and Cancer Discovery Science, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Arnold HanDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA; Columbia Center for Translational Immunology, Department of Medicine, Division of Digestive and Liver Diseases, Department of Microbiology and Immunology, Columbia University Medical Center, New York, NY 10032, USA.
Kelly RoelfDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
Ruben I CalderonColumbia Center for Human Development, Columbia Stem Cell Initiative, Department of Medicine, Division of Digestive and Liver Diseases, Department of Genetics and Development, Columbia University Medical Center, New York, NY 10032, USA.
Esther CynnColumbia Center for Human Development, Columbia Stem Cell Initiative, Department of Medicine, Division of Digestive and Liver Diseases, Department of Genetics and Development, Columbia University Medical Center, New York, NY 10032, USA.
Xiaoyi HuColumbia Center for Human Development, Columbia Stem Cell Initiative, Department of Medicine, Division of Digestive and Liver Diseases, Department of Genetics and Development, Columbia University Medical Center, New York, NY 10032, USA.
Komal MandleywalaColumbia Center for Human Development, Columbia Stem Cell Initiative, Department of Medicine, Division of Digestive and Liver Diseases, Department of Genetics and Development, Columbia University Medical Center, New York, NY 10032, USA.
Julie WilhelmyDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
Sue M GrimesDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
David C CorneyDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
Stéphane C Boutet10x Genomics, Inc., Pleasanton, CA 94566, USA.
Jessica M Terry10x Genomics, Inc., Pleasanton, CA 94566, USA.
Phillip Belgrader10x Genomics, Inc., Pleasanton, CA 94566, USA.
Solongo B Ziraldo10x Genomics, Inc., Pleasanton, CA 94566, USA.
Tarjei S Mikkelsen10x Genomics, Inc., Pleasanton, CA 94566, USA.
Fengchao WangStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Richard J von FurstenbergDepartment of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Nicholas R SmithOregon Health & Science University, Department of Cell, Developmental and Cancer Biology, Portland, OR 97239, USA.
Parthasarathy ChandrakesanDepartment of Internal Medicine, Division of Digestive Diseases and Nutrition, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Randal MayDepartment of Internal Medicine, Division of Digestive Diseases and Nutrition, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Mary Ann S ChrissyDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Rajan JainDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Christine A CartwrightDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
Joyce C NilandDepartment of Diabetes and Cancer Discovery Science, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Young-Kwon HongDepartments of Surgery and of Biochemistry & Molecular Biology, Keck School of Medicine, University of Southern California, Los Angeles, CA 90033, USA.
Jill CarringtonNational Institutes of Health, Division of Digestive Diseases and Nutrition, NIDDK, Bethesda, MD 20892, USA.
David T BreaultDivision of Endocrinology, Boston Children's Hospital, Boston, MA 02115, USA.
Jonathan EpsteinDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Courtney W HouchenDepartment of Internal Medicine, Division of Digestive Diseases and Nutrition, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
John P LynchDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Martin G MartinDepartment of Pediatrics, Division of Gastroenterology and Nutrition, Mattel Children's Hospital and the David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA.
Sylvia K PlevritisDepartment of Radiology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Christina CurtisDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Hanlee P JiDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA.
Linheng LiStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Susan J HenningDepartment of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Melissa H WongOregon Health & Science University, Department of Cell, Developmental and Cancer Biology, Portland, OR 97239, USA.
Calvin J KuoDepartment of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address: cjkuo@stanford.edu.
Stanford University · US10X Genomics (United States) · USColumbia University Irving Medical Center · USUniversity of Pennsylvania · USOregon Health & Science University · USUniversity of Oklahoma Health Sciences Center · USCity of Hope · USStowers Institute for Medical Research · USUniversity of North Carolina at Chapel Hill · USBoston Children's Hospital · USMattel Children's Hospital · USNational Institutes of Health · USUniversity of Southern California · US

Funding

STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI JERROLD R. TURNER · 1986 to 2026
$32.4M
SYNAPTIC MECHANISMS IN HIPPOCAMPAL EPILEPTOGENESISP30HD018655 · NICHD · CHILDREN'S HOSPITAL BOSTON · PI POMEROY, SCOTT LOREN · 1985 to 2015
$26.2M
NUTRITIONT32DK007647 · NIDDK · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anthony W Ferrante, Lori M Zeltser · 1990 to 2026
$7.4M
Regulation of actively proliferating and quiescent intestinal stem cellsU01DK085527 · NIDDK · STANFORD UNIVERSITY · PI KUO, CALVIN J · 2009 to 2023
$6.9M
Intestinal Stem Cell Consortium Coordinating CenterU01DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2009 to 2018
$6.5M
Isolation and Characterization of Intestinal Stem CellsU01DK085507 · NIDDK · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI LI, LINHENG · 2009 to 2023
$6.2M
Intestinal Stem Cell Culture and Entero-Endocrine Lineage DevelopmentU01DK085535 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUNN, JAMES C, MARTIN, MARTIN G · 2009 to 2018
$3.7M
Translating Intestinal Radioprotection by EGLN Inhibition to Improve Clinical Outcomes in Unresectable Pancreatic CancerR01CA227517 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KOONG, ALBERT · 2019 to 2023
$2.3M
Limited Competition for the Continuation of the Intestinal Stem Cell Consortium Coordinating CenterU24DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2019 to 2023
$2.3M
Radiogenomics Framework for Non-Invasive Personalized MedicineR01EB020527 · NIBIB · STANFORD UNIVERSITY · PI GEVAERT, OLIVIER · 2015 to 2018
$2.3M
Characterization of Telomerase Expressing Intestinal Stem CellsR01DK084056 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI BREAULT, DAVID T · 2010 to 2015
$2.2M
The Intestinal Stem Cell NicheU01DK085551 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI LYNCH, JOHN P., RUSTGI, ANIL K · 2009 to 2014
$2.1M
NCI NIH HHS R01 CA227517NHLBI NIH HHS K08 HL119553NIBIB NIH HHS R01 EB020527NICHD NIH HHS P30 HD018655NIDDK NIH HHS K08 DK096048NIDDK NIH HHS K08 DK100739NIDDK NIH HHS P30 DK034854NIDDK NIH HHS R01 DK084056NIDDK NIH HHS R03 DK114656NIDDK NIH HHS T32 DK007647NIDDK NIH HHS U01 DK085507NIDDK NIH HHS U01 DK085508NIDDK NIH HHS U01 DK085525NIDDK NIH HHS U01 DK085527NIDDK NIH HHS U01 DK085532NIDDK NIH HHS U01 DK085535NIDDK NIH HHS U01 DK085547NIDDK NIH HHS U01 DK085551NIDDK NIH HHS U24 DK085532
6 · The paper itself

Abstract

Several cell populations have been reported to possess intestinal stem cell (ISC) activity during homeostasis and injury-induced regeneration. Here, we explored inter-relationships between putative mouse ISC populations by comparative RNA-sequencing (RNA-seq). The transcriptomes of multiple cycling ISC populations closely resembled Lgr5

Indexed as

AnimalsAntigens, DifferentiationEnteroendocrine CellsGene Expression RegulationIntestinal MucosaJejunumMiceMice, TransgenicStem CellsAntigens, Differentiation

Identifiers

PMID28686870
PMCPMC5642297
OpenAlexW2729843964

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.