Evidence map›Paper›PMID 28686727›Full record

ArticlePloS one2017

The Pseudomonas aeruginosa CrcZ RNA interferes with Hfq-mediated riboregulation.

Elisabeth Sonnleitner, Konstantin Prindl, Udo Bläsi

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Hfq-licensed RNA-RNA interactome inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
  9. Regulation of biofilm formation by non-coding RNA in prokaryotes.Current research in pharmacology and drug discovery · 2023
    Review
  10. Article
  11. Article
  12. Microscale Thermophoresis to Study RNA-RNA Binding Affinity.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  13. Rewiring of Gene Expression inFrontiers in microbiology · 2022
    Article
  14. Article
  15. Article
  16. Specific and Global RNA Regulators inInternational journal of molecular sciences · 2021
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Elisabeth SonnleitnerDepartment of Microbiology, Immunobiology and Genetics, Max F. Perutz Laboratories, Center of Molecular Biology, University of Vienna, Vienna Biocenter (VBC), Vienna, Austria.ORCID http://orcid.org/0000-0002-6961-9536
Konstantin PrindlDepartment of Microbiology, Immunobiology and Genetics, Max F. Perutz Laboratories, Center of Molecular Biology, University of Vienna, Vienna Biocenter (VBC), Vienna, Austria.
Udo BläsiDepartment of Microbiology, Immunobiology and Genetics, Max F. Perutz Laboratories, Center of Molecular Biology, University of Vienna, Vienna Biocenter (VBC), Vienna, Austria.

Funding

Austrian Science Fund FWF P 28711
6 · The paper itself

Abstract

The RNA chaperone Hfq regulates virulence and metabolism in the opportunistic pathogen Pseudomonas aeruginosa. During carbon catabolite repression (CCR) Hfq together with the catabolite repression control protein Crc can act as a translational repressor of catabolic genes. Upon relief of CCR, the level of the Hfq-titrating RNA CrcZ is increasing, which in turn abrogates Hfq-mediated translational repression. As the interdependence of Hfq-mediated and RNA based control mechanisms is poorly understood, we explored the possibility whether the regulatory RNA CrcZ can interfere with riboregulation. We first substantiate that the P. aeruginosa Hfq is proficient and required for riboregulation of the transcriptional activator gene antR by the small RNA PrrF1-2. Our studies further revealed that CrcZ can interfere with PrrF1-2/Hfq-mediated regulation of antR. The competition for Hfq can be rationalized by the higher affinity of Hfq for CrcZ than for antR mRNA.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsHost Factor 1 ProteinKineticsMolecular ChaperonesProtein BiosynthesisPseudomonas aeruginosaRepressor ProteinsRibosomesRNA, BacterialRNA, MessengerRNA, Small UntranslatedBacterial Proteinscrc protein, PseudomonasHost Factor 1 ProteinMolecular ChaperonesRepressor ProteinsRNA, BacterialRNA, MessengerRNA, Small Untranslated

Identifiers

PMID28686727
PMCPMC5501646

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.