Evidence map›Paper›PMID 28686207›Full record

ArticleInternational journal of molecular sciences2017

Transgenic Strategies for Sparse but Strong Expression of Genetically Encoded Voltage and Calcium Indicators.

Chenchen Song, Quyen B Do, Srdjan D Antic, Thomas Knöpfel

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. CaScience advances · 2022
    Article
  7. Article
  8. Article
  9. Studying Synaptically Evoked Cortical ResponsesFrontiers in neuroscience · 2021
    Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. eNeuro
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Chenchen SongLaboratory for Neuronal Circuit Dynamics, Imperial College London, London W12 0NN, UK. song@knopfel-lab.net.
Quyen B DoLaboratory for Neuronal Circuit Dynamics, Imperial College London, London W12 0NN, UK. quyen.do-bao14@imperial.ac.uk.
Srdjan D AnticInstitute for Systems Genomics, Stem Cell Institute, UConn Health, Farmington, CT 06030-3401, USA. antic@uchc.edu.
Thomas KnöpfelLaboratory for Neuronal Circuit Dynamics, Imperial College London, London W12 0NN, UK. tknopfel@knopfel-lab.net.

Funding

Sparse, Strong and Large Area Targeting of Genetically Encoded IndicatorsU01MH109091 · NIMH · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI ANTIC, SRDJAN D, KNOPFEL, THOMAS · 2015 to 2017
$1.6M
NIMH NIH HHS U01 MH109091
6 · The paper itself

Abstract

Rapidly progressing development of optogenetic tools, particularly genetically encoded optical indicators, enables monitoring activities of neuronal circuits of identified cell populations in longitudinal in vivo studies. Recently developed advanced transgenic approaches achieve high levels of indicator expression. However, targeting non-sparse cell populations leads to dense expression patterns such that optical signals from neuronal processes cannot be allocated to individual neurons. This issue is particularly pertinent for the use of genetically encoded voltage indicators whose membrane-delimited signals arise largely from the neuropil where dendritic and axonal membranes of many cells intermingle. Here we address this need for sparse but strong expression of genetically encoded optical indicators using a titratable recombination-activated transgene transcription to achieve a Golgi staining-type indicator expression pattern in vivo. Using different transgenic strategies, we also illustrate that co-expression of genetically encoded voltage and calcium indicators can be achieved in vivo for studying neuronal circuit input-output relationships.

Indexed as

Genes, ReporterTransgenesAnimalsCalcium ChannelsCell LineIntegrasesMice, TransgenicPyramidal CellsRecombination, GeneticSubcellular FractionsTrimethoprimCalcium ChannelsCre recombinaseIntegrasesTrimethoprimcontrolled recombinationgenetically encodedinducible expressionintersectionaltransgenicvoltage indicator

Identifiers

PMID28686207
PMCPMC5535952

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.