Evidence map›Paper›PMID 28685978›Full record

ArticleMicrobiologyOpen2017

The viable but nonculturable state induction and genomic analyses of Lactobacillus casei BM-LC14617, a beer-spoilage bacterium.

Junyan Liu, Lin Li, Brian M Peters, Bing Li, Lequn Chen, Yang Deng, Zhenbo Xu, Mark E Shirtliff

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Biofilm formation of two genetically diverseFrontiers in microbiology · 2023
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Spoilage Lactic Acid Bacteria in the Brewing Industry.Journal of microbiology and biotechnology · 2020
    Review
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Junyan LiuSchool of Food Science and Engineering, South China University of Technology, Guangzhou, China.
Lin LiSchool of Food Science and Engineering, South China University of Technology, Guangzhou, China.
Brian M PetersDepartment of Clinical Pharmacy, College of Pharmacy, University of Tennessee Health Science Center, Memphis, Tennessee.
Bing LiSchool of Food Science and Engineering, South China University of Technology, Guangzhou, China.
Lequn ChenSchool of Food Science and Engineering, South China University of Technology, Guangzhou, China.
Yang DengSchool of Food Science and Engineering, South China University of Technology, Guangzhou, China.
Zhenbo XuSchool of Food Science and Engineering, South China University of Technology, Guangzhou, China.ORCID 0000-0003-2865-2441
Mark E ShirtliffDepartment of Microbial Pathogenesis, School of Dentistry, University of Maryland, Baltimore, Maryland.
Key Laboratory of Guangdong Province · CNSouth China University of Technology · CNUniversity of Maryland, Baltimore · USUniversity of Tennessee Health Science Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aimed to investigate the viable but nonculturable (VBNC) state and genomic features of a beer-spoilage strain, Lactobacillus caseiBM-LC14617. Induction on the VBNC state of L. casei strain BM-LC14617 was conducted by both low-temperature storage and continuous passage in beer, and formation of VBNC state was detected after 196 ± 3.3 days and 32 ± 1.6 subcultures, respectively. Resuscitation of VBNC cells was successfully induced by addition of catalase, and culturable, VBNC, and resuscitated cells shared similar beer-spoilage capability. Whole genome sequencing was performed, and out of a total of 3,964 predicted genes, several potential VBNC and beer-spoilage-associated genes were identified. L. casei is capable of entering into and resuscitating from the VBNC state and possesses beer-spoilage capability. The genomic characterization yield insightful elucidation of VBNC state for L. casei. This study represents the first evidence on VBNC state induction of L. casei and beer-spoilage capability of VBNC and resuscitated cells. Also, this is the first genomic characterization of L. casei as a beer-spoilage bacterium. The current study may aid in further study on L. casei and other beer-spoilage bacteria, and guide the prevention and control of beer spoilage.

Indexed as

BeerFood MicrobiologyGenome, BacterialGenomicsComputational BiologyLacticaseibacillus caseiMicrobial ViabilityMolecular Sequence AnnotationWhole Genome Sequencingbeer-spoilagegenomic sequencingLactobacillus caseiVBNC state

Identifiers

PMID28685978
PMCPMC5635166
OpenAlexW2724302440

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.