Evidence map›Paper›PMID 28685972›Full record

ArticleImmunity, inflammation and disease2017

KIR2DS5 allotypes that recognize the C2 epitope of HLA-C are common among Africans and absent from Europeans.

Jeroen H Blokhuis, Hugo G Hilton, Lisbeth A Guethlein, Paul J Norman, Neda Nemat-Gorgani, Annettee Nakimuli, Olympe Chazara, Ashley Moffett, Peter Parham

Open access · goldAbstract read
In one paragraph

Article in Immunity, inflammation and disease, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 56 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Jeroen H BlokhuisDepartments of Structural Biology and Microbiology and Immunology, Stanford University, Stanford, CA, USA.
Hugo G HiltonDepartments of Structural Biology and Microbiology and Immunology, Stanford University, Stanford, CA, USA.
Lisbeth A GuethleinDepartments of Structural Biology and Microbiology and Immunology, Stanford University, Stanford, CA, USA.ORCID 0000-0002-1301-8301
Paul J NormanDepartments of Structural Biology and Microbiology and Immunology, Stanford University, Stanford, CA, USA.
Neda Nemat-GorganiDepartments of Structural Biology and Microbiology and Immunology, Stanford University, Stanford, CA, USA.
Annettee NakimuliDepartment of Obstetrics and Gynaecology, Makerere University, Kampala, Uganda.
Olympe ChazaraDepartment of Pathology and Centre for Trophoblast Research, University of Cambridge, Cambridge, United Kingdom.
Ashley MoffettDepartment of Pathology and Centre for Trophoblast Research, University of Cambridge, Cambridge, United Kingdom.
Peter ParhamDepartments of Structural Biology and Microbiology and Immunology, Stanford University, Stanford, CA, USA.
Stanford University · USUniversity of Cambridge · GBMakerere University · UG

Funding

Insights Into Immune-Related Diseases Born from Population GenomicsU01AI090905 · NIAID · UNIVERSITY OF COLORADO DENVER · PI Paul John Norman · 2010 to 2026
$10.9M
STRUCTURAL BIOLOGY OF HLA-A,B ANTIGENSR01AI017892 · NIAID · STANFORD UNIVERSITY · PI PARHAM, PETER R · 1985 to 2019
$6.1M
INTERACTIONS BETWEEN HLA CLASS I &CYTOLYTIC LYMPHOCYTESR01AI022039 · NIAID · STANFORD UNIVERSITY · PI PARHAM, PETER R · 1985 to 2017
$5.2M
British Heart Foundation PG/09/077/27964NIAID NIH HHS R01 AI017892NIAID NIH HHS R01 AI022039NIAID NIH HHS U01 AI090905
6 · The paper itself

Abstract

introductionKIR2DS5 is an activating human NK cell receptor of lineage III KIR. These include both inhibitory KIR2DL1, 2 and 3 and activating KIR2DS1 that recognize either the C1 or C2 epitope of HLA-C. In Europeans KIR2DS5 is essentially monomorphic, with KIR2DS5*002 being predominant. Pioneering investigations showed that KIR2DS5*002 has activating potential, but cannot recognize HLA-A, -B, or -C. Subsequent studies have shown that KIR2DS5 is highly polymorphic in Africans, and that KIR2DS5*006 protects pregnant Ugandan women from preeclampsia. Because inhibitory C2-specific KIR2DL1 correlates with preeclampsia, whereas activating C2-specific KIR2DS1 protects, this association pointed to KIR2DS5*006 being an activating C2-specific receptor. To test this hypothesis we made KIR-Fc fusion proteins from all ten KIR2DS5 allotypes and tested their binding to a representative set of HLA-A, -B and -C allotypes.

resultsSix African-specific KIR2DS5 bound to C2

conclusionsKIR2DS5*005 has the KIR2DS5 consensus sequence, is the only allele found at both centromeric and telomeric locations of KIR2DS5, and is likely the common ancestor of all KIR2DS5 alleles. That KIR2DS5*005 has C2 receptor activity, points to KIR2DS5*002, and other allotypes lacking C2 receptor function, being products of attenuation, a characteristic feature of most KIR B haplotype genes. Alleles encoding attenuated and active KIR2DS5 are present in both centromeric and telomeric locations.

Indexed as

Black PeopleWhite PeopleAllelesEpitopesFemaleHLA-C AntigensHumansKiller Cells, NaturalLinkage DisequilibriumPolymorphism, GeneticPregnancyProtein BindingProtein Interaction Domains and MotifsReceptors, KIREpitopesHLA-C AntigensKIR2DS5 protein, humanReceptors, KIRAfricaHLA-CKIRNK cellspregnancy

Identifiers

PMID28685972
PMCPMC5691316
OpenAlexW2726388807

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.