Evidence map›Paper›PMID 28681606›Full record

ArticleBiochemistry2017

Identification of Two Secondary Ligand Binding Sites in 14-3-3 Proteins Using Fragment Screening.

Eline Sijbesma, Lukasz Skora, Seppe Leysen, Luc Brunsveld, Uwe Koch, Peter Nussbaumer, Wolfgang Jahnke, Christian Ottmann

Open access · hybridAbstract read
In one paragraph

Article in Biochemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Deciphering opening mechanisms of 14-3-3 proteins.Protein science : a publication of the Protein Society · 2025
    Article
  4. Identification ofMolecules (Basel, Switzerland) · 2025
    Article
  5. Article
  6. Development of a NanoBRET assay for evaluation of 14-3-3σ molecular glues.SLAS discovery : advancing life sciences R & D · 2024
    Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. A new soaking procedure for X-ray crystallographic structural determination of protein-peptide complexes.Acta crystallographica. Section F, Structural biology communications · 2020
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. 14-3-3: A Case Study in PPI Modulation.Molecules (Basel, Switzerland) · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Eline SijbesmaDepartment of Biomedical Engineering, Laboratory of Chemical Biology, and Institute for Complex Molecular Systems, Eindhoven University of Technology , P.O. Box 513, 5600 MB Eindhoven, The Netherlands.
Lukasz SkoraChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research , 4002 Basel, Switzerland.
Seppe LeysenDepartment of Biomedical Engineering, Laboratory of Chemical Biology, and Institute for Complex Molecular Systems, Eindhoven University of Technology , P.O. Box 513, 5600 MB Eindhoven, The Netherlands.
Luc BrunsveldDepartment of Biomedical Engineering, Laboratory of Chemical Biology, and Institute for Complex Molecular Systems, Eindhoven University of Technology , P.O. Box 513, 5600 MB Eindhoven, The Netherlands.ORCID 0000-0001-5675-511X
Uwe KochLead Discovery Center GmbH , Otto-Hahn-Straße 15, 44227 Dortmund, Germany.
Peter NussbaumerLead Discovery Center GmbH , Otto-Hahn-Straße 15, 44227 Dortmund, Germany.
Wolfgang JahnkeChemical Biology and Therapeutics, Novartis Institutes for Biomedical Research , 4002 Basel, Switzerland.ORCID 0000-0002-7003-3305
Christian OttmannDepartment of Biomedical Engineering, Laboratory of Chemical Biology, and Institute for Complex Molecular Systems, Eindhoven University of Technology , P.O. Box 513, 5600 MB Eindhoven, The Netherlands.ORCID 0000-0001-7315-0315
Eindhoven University of Technology · NLLead Discovery Center (Germany) · DENovartis (Switzerland) · CHUniversity of Duisburg-Essen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteins typically interact with multiple binding partners, and often different parts of their surfaces are employed to establish these protein-protein interactions (PPIs). Members of the class of 14-3-3 adapter proteins bind to several hundred other proteins in the cell. Multiple small molecules for the modulation of 14-3-3 PPIs have been disclosed; however, they all target the conserved phosphopeptide binding channel, so that selectivity is difficult to achieve. Here we report on the discovery of two individual secondary binding sites that have been identified by combining nuclear magnetic resonance-based fragment screening and X-ray crystallography. The two pockets that these fragments occupy are part of at least three physiologically relevant and structurally characterized 14-3-3 PPI interfaces, including those with serotonin N-acetyltransferase and plant transcription factor FT. In addition, the high degree of conservation of the two sites implies their relevance for 14-3-3 PPIs. This first identification of secondary sites on 14-3-3 proteins bound by small molecule ligands might facilitate the development of new chemical tool compounds for more selective PPI modulation.

Indexed as

Models, Molecular14-3-3 ProteinsAcyltransferasesAmino Acid SequenceBinding SitesBiomarkers, TumorConserved SequenceCrystallography, X-RayExoribonucleasesGene DeletionHumansKineticsLigandsNuclear Magnetic Resonance, BiomolecularPeptide FragmentsPeptide Library14-3-3 ProteinsAcyltransferasesBiomarkers, TumorExoribonucleasesLigandsPeptide FragmentsPeptide LibraryProtein IsoformsRecombinant Fusion ProteinsRecombinant ProteinsSFN protein, humanTAFAZZIN protein, humanTranscription Factors

Identifiers

PMID28681606
PMCPMC5543393
OpenAlexW2733023574

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.