Evidence map›Paper›PMID 28680911›Full record

ArticleJournal of medical imaging (Bellingham, Wash.)2017

Ziehl-Neelsen sputum smear microscopy image database: a resource to facilitate automated bacilli detection for tuberculosis diagnosis.

Mohammad Imran Shah, Smriti Mishra, Vinod Kumar Yadav, Arun Chauhan, Malay Sarkar, Sudarshan K Sharma, Chittaranjan Rout

Abstract read
In one paragraph

Article in Journal of medical imaging (Bellingham, Wash.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. AutomatedInternational journal of biomedical imaging · 2026
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  8. Journal of clinical orthopaedics and trauma · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Mohammad Imran ShahJaypee University of Information Technology, Department of Biotechnology and Bioinformatics, Waknaghat, Himachal Pradesh, India.
Smriti MishraJaypee University of Information Technology, Department of Biotechnology and Bioinformatics, Waknaghat, Himachal Pradesh, India.
Vinod Kumar YadavJaypee University of Information Technology, Department of Biotechnology and Bioinformatics, Waknaghat, Himachal Pradesh, India.
Arun ChauhanJaypee University of Information Technology, Department of Biotechnology and Bioinformatics, Waknaghat, Himachal Pradesh, India.
Malay SarkarIndira Gandhi Medical College, Department of Pulmonary Medicine, Shimla, India.
Sudarshan K SharmaIndira Gandhi Medical College, Department of Pathology, Shimla, India.
Chittaranjan RoutJaypee University of Information Technology, Department of Biotechnology and Bioinformatics, Waknaghat, Himachal Pradesh, India.
Jaypee University of Information Technology · INIndira Gandhi Medical College · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ziehl-Neelsen stained microscopy is a crucial bacteriological test for tuberculosis detection, but its sensitivity is poor. According to the World Health Organization (WHO) recommendation, 300 viewfields should be analyzed to augment sensitivity, but only a few viewfields are examined due to patient load. Therefore, tuberculosis diagnosis through automated capture of the focused image (autofocusing), stitching of viewfields to form mosaics (autostitching), and automatic bacilli segmentation (grading) can significantly improve the sensitivity. However, the lack of unified datasets impedes the development of robust algorithms in these three domains. Therefore, the Ziehl-Neelsen sputum smear microscopy image database (ZNSM iDB) has been developed, and is freely available. This database contains seven categories of diverse datasets acquired from three different bright-field microscopes. Datasets related to autofocusing, autostitching, and manually segmenting bacilli can be used for developing algorithms, whereas the other four datasets are provided to streamline the sensitivity and specificity. All three categories of datasets were validated using different automated algorithms. As images available in this database have distinctive presentations with high noise and artifacts, this referral resource can also be used for the validation of robust detection algorithms. The ZNSM-iDB also assists for the development of methods in automated microscopy.

Indexed as

autofocusingautomated microscopyautostitchingbacilli segmentationcomputer-aided diagnosisconventional microscopy image databasetuberculosis

Identifiers

PMID28680911
PMCPMC5492794
OpenAlexW2725176877

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.