Evidence map›Paper›PMID 28680808›Full record

ArticleFEBS open bio2017

Sequence motifs capable of forming DNA stem-loop structures act as a replication diode.

Andrey Shirak, Uri Seroussi, Elisha Gootwine, Eyal Seroussi

Abstract read
In one paragraph

Article in FEBS open bio, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Andrey ShirakInstitute of Animal Science Agricultural Research Organization (ARO) Rishon Le Tsiyon Israel.
Uri SeroussiDepartment of Neurobiology Wise Faculty of Life Sciences and Sagol School Tel Aviv University Israel.
Elisha GootwineInstitute of Animal Science Agricultural Research Organization (ARO) Rishon Le Tsiyon Israel.
Eyal SeroussiInstitute of Animal Science Agricultural Research Organization (ARO) Rishon Le Tsiyon Israel.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calculating peak-height ratios between single-nucleotide polymorphisms (SNP) alleles in sequencing chromatograms is a practical method for estimating their copy number proportions (CNPs). However, it is surprising that sequencing DNA from different directions might yield different results. We analyzed three adjacent SNPs within the ovine period circadian-clock 2 (

Indexed as

DNA loop structureDNA stabilityDNA thermodynamicsmicroRNAorientation‐dependent block

Identifiers

PMID28680808
PMCPMC5494291

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.