Evidence map›Paper›PMID 28680070›Full record

ArticleScientific reports2017

Whole Mitogenomes Reveal the History of Swamp Buffalo: Initially Shaped by Glacial Periods and Eventually Modelled by Domestication.

S Wang, N Chen, M R Capodiferro, T Zhang, H Lancioni, H Zhang, Y Miao, V Chanthakhoun, M Wanapat, M Yindee and 11 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
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  10. Review
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  13. Review
  14. Mitogenome Diversity and Maternal Origins of Guangxi Buffalo Breeds.Animals : an open access journal from MDPI · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Abundant Genetic Diversity of Yunling Cattle Based on Mitochondrial Genome.Animals : an open access journal from MDPI · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

S WangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
N ChenCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
M R CapodiferroDipartimento di Biologia e Biotecnologie "L. Spallanzani", Università di Pavia, Pavia, 27100, Italy.
T ZhangSchool of Bioscience and Engineering, Shaanxi University of Technology, Hanzhong, Shaanxi, 723000, China.
H LancioniDipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, Perugia, 06123, Italy.
H ZhangKey Laboratory of Plateau Lake Ecology and Global Change, College of Tourism and Geography, Yunnan Normal University, Kunming, Yunnan, 650500, China.
Y MiaoFaculty of Animal Science and Technology, Yunnan Agricultural University, Kunming, Yunnan, 650201, China.
V ChanthakhounDepartment of Animal Science, Faculty of Agriculture and Forest Resource, Souphanouvong University, Luang Prabang, Laos.
M WanapatTropical Feed Resources Research and Development Center, Department of Animal Science, Faculty of Agriculture, Khon Kaen University, Khon Kaen, 40002, Thailand.
M YindeeDepartment of Clinical Science and Public Health, Faculty of Veterinary Science, Mahidol University, Kanchanaburi campus, Kanchanaburi, 71150, Thailand.
Y ZhangNational Engineering Laboratory for Animal Breeding, Key Laboratory of Aniaml Genetics and Breeding and Reproduction of MOA, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.
H LuSchool of Bioscience and Engineering, Shaanxi University of Technology, Hanzhong, Shaanxi, 723000, China.
L CaporaliIRCCS Institute of Neurological Sciences of Bologna, Bologna, 40139, Italy.
R DangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
Y HuangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
X LanCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
M PlathCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
H ChenCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
J A LenstraFaculty of Veterinary Medicine, Utrecht University, Yalelaan 104, 3584 CM, Utrecht, The Netherlands.
A AchilliDipartimento di Biologia e Biotecnologie "L. Spallanzani", Università di Pavia, Pavia, 27100, Italy. alessandro.achilli@unipv.it.ORCID 0000-0001-6871-3451
C LeiCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China. leichuzhao1118@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The newly sequenced mitochondrial genomes of 107 Asian swamp buffalo (Bubalus bubalis carabensis) allowed the reconstruction of the matrilineal divergence since ~900 Kya. Phylogenetic trees and Bayesian skyline plots suggest a role of the glacial periods in the demographic history of swamp buffalo. The ancestral swamp-buffalo mitogenome is dated ~232 ± 35 Kya. Two major macro-lineages diverged during the 2

Indexed as

Genome, MitochondrialAnimalsAnimals, DomesticAsia, SoutheasternBuffaloesDomesticationGene FlowPhylogenyPhylogeographySequence Analysis, DNA

Identifiers

PMID28680070
PMCPMC5498497

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.