Evidence map›Paper›PMID 28679954›Full record

ArticleJCI insight2017

Errors in data interpretation from genetic variation of human analytes.

Heather L Howie, Meghan Delaney, Xiaohong Wang, Lay See Er, Linda Kapp, Jenna N Lebedev, James C Zimring

Abstract read
In one paragraph

Article in JCI insight, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. The Ligands for Human IgG and Their Effector Functions.Antibodies (Basel, Switzerland) · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Heather L HowieBloodworksNW Research Institute, Seattle, Washington, USA.
Meghan DelaneyBloodworksNW Research Institute, Seattle, Washington, USA.
Xiaohong WangBloodworksNW Research Institute, Seattle, Washington, USA.
Lay See ErBloodworksNW Research Institute, Seattle, Washington, USA.
Linda KappBloodworksNW Research Institute, Seattle, Washington, USA.
Jenna N LebedevBloodworksNW Research Institute, Seattle, Washington, USA.
James C ZimringBloodworksNW Research Institute, Seattle, Washington, USA.

Funding

Pathobiology of Incompatible transfusionR01HL112790 · NHLBI · BLOODWORKS · PI ZIMRING, JAMES C. · 2013 to 2017
$2.1M
NHLBI NIH HHS R01 HL112790
6 · The paper itself

Abstract

In recent years, the extent of our vulnerability to misinterpretation due to poorly characterized reagents has become an issue of great concern. Antibody reagents have been identified as a major source of error, contributing to the "reproducibility crisis." In the current report, we define an additional dimension of the crisis; in particular, we define variation of the targets being analyzed. We report that natural variation in the immunoglobulin "constant" region alters the reactivity with commonly used subtype-specific anti-IgG reagents, resulting in cross-reactivity of polyclonal regents with inappropriate targets and blind spots of monoclonal reagents for desired targets. This raises the practical concern that numerous studies characterizing IgG subtypes in human disease may contain errors due to such previously unappreciated defects. These studies also focus attention on the broader concern that genetic variation may affect the performance of any laboratory or research test that uses antibodies for detection.

Indexed as

GeneticsImmunology

Identifiers

PMID28679954
PMCPMC5499359

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.