Evidence map›Paper›PMID 28679684›Full record

ArticleMolecular & cellular proteomics : MCP2017

Study of the Plasma Membrane Proteome Dynamics Reveals Novel Targets of the Nitrogen Regulation in Yeast.

Jennifer Villers, Jérôme Savocco, Aleksandra Szopinska, Hervé Degand, Sylvain Nootens, Pierre Morsomme

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. α-Arrestins and Their Functions: From Yeast to Human Health.International journal of molecular sciences · 2022
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. AMPK-Mediated Regulation of Alpha-Arrestins and Protein Trafficking.International journal of molecular sciences · 2019
    Review
  9. Article
  10. Conformation-dependent partitioning of yeast nutrient transporters into starvation-protective membrane domains.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jennifer VillersFrom the ‡Université catholique de Louvain, Institut des Sciences de la Vie, Croix du Sud 4-5, B-1348 Louvain-la-Neuve.
Jérôme SavoccoFrom the ‡Université catholique de Louvain, Institut des Sciences de la Vie, Croix du Sud 4-5, B-1348 Louvain-la-Neuve.
Aleksandra SzopinskaFrom the ‡Université catholique de Louvain, Institut des Sciences de la Vie, Croix du Sud 4-5, B-1348 Louvain-la-Neuve.
Hervé DegandFrom the ‡Université catholique de Louvain, Institut des Sciences de la Vie, Croix du Sud 4-5, B-1348 Louvain-la-Neuve.
Sylvain NootensFrom the ‡Université catholique de Louvain, Institut des Sciences de la Vie, Croix du Sud 4-5, B-1348 Louvain-la-Neuve.
Pierre MorsommeFrom the ‡Université catholique de Louvain, Institut des Sciences de la Vie, Croix du Sud 4-5, B-1348 Louvain-la-Neuve pierre.morsomme@uclouvain.be.ORCID 0000-0001-7780-7230
UCLouvain · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yeast cells, to be able to grow on a wide variety of nitrogen sources, regulate the set of nitrogen transporters present at their plasma membrane. Such regulation relies on both transcriptional and post-translational events. Although microarray studies have identified most nitrogen-sensitive genes, nitrogen-induced post-translational regulation has only been studied for very few proteins among which the general amino acid permease Gap1. Adding a preferred nitrogen source to proline-grown cells triggers Gap1 endocytosis and vacuolar degradation in an Rsp5-Bul1/2-dependent manner. Here, we used a proteomic approach to follow the dynamics of the plasma membrane proteome after addition of a preferred nitrogen source. We identified new targets of the nitrogen regulation and four transporters of poor nitrogen sources-Put4, Opt2, Dal5, and Ptr2-that rapidly decrease in abundance. Although the kinetics is different for each transporter, we found that three of them-Put4, Dal5, and Ptr2-are endocytosed, like Gap1, in an Rsp5-dependent manner and degraded in the vacuole. Finally, we showed that Gap1 stabilization at the plasma membrane, through deletion of Bul proteins, regulates the abundance of Put4, Dal5 and Ptr2.

Indexed as

Ammonium CompoundsCell MembraneEndocytosisGene DeletionMembrane Transport ProteinsModels, BiologicalNitrogenProlineProteolysisProteomeSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsVacuolesAmmonium CompoundsMembrane Transport ProteinsNitrogenProlineProteomeSaccharomyces cerevisiae Proteins

Identifiers

PMID28679684
PMCPMC5587864
OpenAlexW2726071930

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.