Evidence map›Paper›PMID 28678862›Full record

ArticlePloS one2017

Pseudomonas aeruginosa cells attached to a surface display a typical proteome early as 20 minutes of incubation.

Marc Crouzet, Stéphane Claverol, Anne-Marie Lomenech, Caroline Le Sénéchal, Patricia Costaglioli, Christophe Barthe, Bertrand Garbay, Marc Bonneu, Sébastien Vilain

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
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  4. Article
  5. Article
  6. Review
  7. Article
  8. Nutrient Sensing and Biofilm Modulation: The Example of L-arginine inInternational journal of molecular sciences · 2022
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. MacAB-TolC Contributes to the Development ofFrontiers in microbiology · 2021
    Article
  16. Phosphorylation of Extracellular Proteins inFrontiers in microbiology · 2021
    Article
  17. Article
  18. RidA Proteins Protect against Metabolic Damage by Reactive Intermediates.Microbiology and molecular biology reviews : MMBR · 2020
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Marc CrouzetSpectrométrie de Masse des Macromolécules Biologiques, Chimie Biologie des Membranes et Nanoobjets, UMR CNRS 5248, Institut National Polytechnique de Bordeaux, Université de Bordeaux, Bordeaux, France.
Stéphane ClaverolPlateforme Protéome, Centre Génomique Fonctionnelle de Bordeaux, Université de Bordeaux, Bordeaux, France.
Anne-Marie LomenechPlateforme Protéome, Centre Génomique Fonctionnelle de Bordeaux, Université de Bordeaux, Bordeaux, France.
Caroline Le SénéchalSpectrométrie de Masse des Macromolécules Biologiques, Chimie Biologie des Membranes et Nanoobjets, UMR CNRS 5248, Institut National Polytechnique de Bordeaux, Université de Bordeaux, Bordeaux, France.
Patricia CostaglioliSpectrométrie de Masse des Macromolécules Biologiques, Chimie Biologie des Membranes et Nanoobjets, UMR CNRS 5248, Institut National Polytechnique de Bordeaux, Université de Bordeaux, Bordeaux, France.
Christophe BartheSpectrométrie de Masse des Macromolécules Biologiques, Chimie Biologie des Membranes et Nanoobjets, UMR CNRS 5248, Institut National Polytechnique de Bordeaux, Université de Bordeaux, Bordeaux, France.
Bertrand GarbayLaboratoire de Chimie des Polymères Organiques, UMR CNRS 5629, Institut National Polytechnique de Bordeaux, Université de Bordeaux, Bordeaux, France.
Marc BonneuSpectrométrie de Masse des Macromolécules Biologiques, Chimie Biologie des Membranes et Nanoobjets, UMR CNRS 5248, Institut National Polytechnique de Bordeaux, Université de Bordeaux, Bordeaux, France.
Sébastien VilainSpectrométrie de Masse des Macromolécules Biologiques, Chimie Biologie des Membranes et Nanoobjets, UMR CNRS 5248, Institut National Polytechnique de Bordeaux, Université de Bordeaux, Bordeaux, France.ORCID http://orcid.org/0000-0003-0134-8511

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biofilms are present in all environments and often result in negative effects due to properties of the biofilm lifestyle and especially antibiotics resistance. Biofilms are associated with chronic infections. Controlling bacterial attachment, the first step of biofilm formation, is crucial for fighting against biofilm and subsequently preventing the persistence of infection. Thus deciphering the underlying molecular mechanisms involved in attachment could allow discovering molecular targets from it would be possible to develop inhibitors against bacterial colonization and potentiate antibiotherapy. To identify the key components and pathways that aid the opportunistic pathogen Pseudomonas aeruginosa in attachment we performed for the first time a proteomic analysis as early as after 20 minutes of incubation using glass wool fibers as a surface. We compared the protein contents of the attached and unattached bacteria. Using mass spectrometry, 3043 proteins were identified. Our results showed that, as of 20 minutes of incubation, using stringent quantification criteria 616 proteins presented a modification of their abundance in the attached cells compared to their unattached counterparts. The attached cells presented an overall reduced gene expression and characteristics of slow-growing cells. The over-accumulation of outer membrane proteins, periplasmic folding proteins and O-antigen chain length regulators was also observed, indicating a profound modification of the cell envelope. Consistently the sigma factor AlgU required for cell envelope homeostasis was highly over-accumulated in attached cells. In addition our data suggested a role of alarmone (p)ppGpp and polyphosphate during the early attachment phase. Furthermore, almost 150 proteins of unknown function were differentially accumulated in the attached cells. Our proteomic analysis revealed the existence of distinctive biological features in attached cells as early as 20 minutes of incubation. Analysis of some mutants demonstrated the interest of this proteomic approach in identifying genes involved in the early phase of adhesion to a surface.

Indexed as

Bacterial AdhesionBacterial ProteinsBiofilmsGene Expression Regulation, BacterialGlassProteomeProteomicsPseudomonas aeruginosaReproducibility of ResultsSignal TransductionSurface PropertiesTime FactorsBacterial ProteinsfiberglassProteome

Identifiers

PMID28678862
PMCPMC5498041

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.