Evidence map›Paper›PMID 28677295›Full record

ArticleHuman mutation2017

BOC is a modifier gene in holoprosencephaly.

Mingi Hong, Kshitij Srivastava, Sungjin Kim, Benjamin L Allen, Daniel J Leahy, Ping Hu, Erich Roessler, Robert S Krauss, Maximilian Muenke

Open access · greenAbstract read
In one paragraph

Article in Human mutation, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. NewMolecular syndromology · 2021
    Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Hedgehog Signal and Genetic Disorders.Frontiers in genetics · 2019
    Review
  12. Modeling the complex etiology of holoprosencephaly in mice.American journal of medical genetics. Part C, Seminars in medical genetics · 2018
    Review
  13. Article
  14. Extracephalic manifestations of nonchromosomal, nonsyndromic holoprosencephaly.American journal of medical genetics. Part C, Seminars in medical genetics · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Mingi HongDepartment of Cell, Developmental, and Regenerative Biology, Icahn School of Medicine at Mount Sinai, New York, New York.
Kshitij SrivastavaMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
Sungjin KimDepartment of Cell, Developmental, and Regenerative Biology, Icahn School of Medicine at Mount Sinai, New York, New York.
Benjamin L AllenDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, Michigan.
Daniel J LeahyDepartment of Molecular Biosciences, University of Texas at Austin, Austin, Texas.
Ping HuMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
Erich RoesslerMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
Robert S KraussDepartment of Cell, Developmental, and Regenerative Biology, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-7661-3335
Maximilian MuenkeMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland.
National Institutes of Health · USIcahn School of Medicine at Mount Sinai · USKraussMaffei (Germany) · DEThe University of Texas at Austin · USUniversity of Michigan · USZero to Three · US

Funding

Genetics of Brain DevelopmentZIAHG000209 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI KRUSZKA, PAUL · 2009 to 2020
$18.2M
Molecular and Developmental Analysis of HoloprosencephalyR01DE024748 · NIDCR · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Robert S. Krauss · 2015 to 2026
$5.2M
Dosage-Dependent Hedgehog Signaling in Pancreatic CancerR01CA198074 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ALLEN, BENJAMIN, PASCA DI MAGLIANO, MARINA · 2015 to 2019
$1.9M
Kinesin-2 Regulation of GLI Function in Hedgehog Signal TransductionR01GM118751 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ALLEN, BENJAMIN · 2016 to 2019
$1.3M
NCI NIH HHS R01 CA198074NIDCR NIH HHS R01 DE024748NIGMS NIH HHS R01 GM118751
6 · The paper itself

Abstract

Holoprosencephaly (HPE), a common developmental defect of the forebrain and midface, has a complex etiology. Heterozygous, loss-of-function mutations in the sonic hedgehog (SHH) pathway are associated with HPE. However, mutation carriers display highly variable clinical presentation, leading to an "autosomal dominant with modifier" model, in which the penetrance and expressivity of a predisposing mutation is graded by genetic or environmental modifiers. Such modifiers have not been identified. Boc encodes a SHH coreceptor and is a silent HPE modifier gene in mice. Here, we report the identification of missense BOC variants in HPE patients. Consistent with these alleles functioning as HPE modifiers, individual variant BOC proteins had either loss- or gain-of-function properties in cell-based SHH signaling assays. Therefore, in addition to heterozygous loss-of-function mutations in specific SHH pathway genes and an ill-defined environmental component, our findings identify a third variable in HPE: low-frequency modifier genes, BOC being the first identified.

Indexed as

Genes, ModifierAnimalsGene ExpressionGenetic VariationHoloprosencephalyHumansImmunoglobulin GMiceModels, MolecularMutationProtein ConformationProtein DomainsReceptors, Cell SurfaceBOC protein, humanImmunoglobulin GReceptors, Cell Surfacebirth defectBOCgene variantholoprosencephalymodifier genesonic hedgehog

Identifiers

PMID28677295
PMCPMC5673120
OpenAlexW2756000950

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.