Evidence map›Paper›PMID 28677008›Full record

ArticlePhotosynthesis research2017

Pigment structure in the violaxanthin-chlorophyll-a-binding protein VCP.

Manuel J Llansola-Portoles, Radek Litvin, Cristian Ilioaia, Andrew A Pascal, David Bina, Bruno Robert

Abstract read
PubMed Publisher
In one paragraph

Article in Photosynthesis research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Enhancement of violaxanthin accumulation inFrontiers in microbiology · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. A new, unquenched intermediate of LHCII.The Journal of biological chemistry
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Manuel J Llansola-PortolesInstitute for Integrative Biology of the Cell (I2BC), IBITECS, CEA, CNRS, Université Paris-Saclay, 91198, Gif-sur-Yvette Cedex, France. manuel.llansola@cea.fr.
Radek LitvinInstitute of Plant Molecular Biology, Biology Centre CAS, Branisovska 31, 370 05, Ceske Budejovice, Czech Republic.ORCID http://orcid.org/0000-0001-5272-9029
Cristian IlioaiaInstitute for Integrative Biology of the Cell (I2BC), IBITECS, CEA, CNRS, Université Paris-Saclay, 91198, Gif-sur-Yvette Cedex, France.
Andrew A PascalInstitute for Integrative Biology of the Cell (I2BC), IBITECS, CEA, CNRS, Université Paris-Saclay, 91198, Gif-sur-Yvette Cedex, France.
David BinaInstitute of Plant Molecular Biology, Biology Centre CAS, Branisovska 31, 370 05, Ceske Budejovice, Czech Republic.
Bruno RobertInstitute for Integrative Biology of the Cell (I2BC), IBITECS, CEA, CNRS, Université Paris-Saclay, 91198, Gif-sur-Yvette Cedex, France.
Centre National de la Recherche Scientifique · FRUniversity of South Bohemia in České Budějovice · CZ

Funding

Czech Science Foundation 14-01377PEuropean Research Council PHOTPROT project
6 · The paper itself

Abstract

Resonance Raman spectroscopy was used to evaluate pigment-binding site properties in the violaxanthin-chlorophyll-a-binding protein (VCP) from Nannochloropsis oceanica. The pigments bound to this antenna protein are chlorophyll-a, violaxanthin, and vaucheriaxanthin. The molecular structures of bound Chl-a molecules are discussed with respect to those of the plant antenna proteins LHCII and CP29, the crystal structures of which are known. We show that three populations of carotenoid molecules are bound by VCP, each of which is in an all-trans configuration. We assign the lower-energy absorption transition of each of these as follows. One violaxanthin population absorbs at 485 nm, while the second population is red-shifted and absorbs at 503 nm. The vaucheriaxanthin population absorbs at 525 nm, a position red-shifted by 2138 cm

Indexed as

CarotenoidsCarrier ProteinsChlorophyllLight-Harvesting Protein ComplexesSpectrum Analysis, RamanXanthophyllsCarotenoidsCarrier ProteinsChlorophyllLight-Harvesting Protein ComplexesviolaxanthinXanthophyllsCarotenoidsLight-harvesting complexNannochloropsis oceanicaResonance RamanVCP

Identifiers

PMID28677008
OpenAlexW2727388058

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.