Evidence map›Paper›PMID 28676693›Full record

ArticleScientific reports2017

Selective breeding and selection mapping using a novel wild-derived heterogeneous stock of mice revealed two closely-linked loci for tameness.

Yuki Matsumoto, Tatsuhiko Goto, Jo Nishino, Hirofumi Nakaoka, Akira Tanave, Toshiyuki Takano-Shimizu, Richard F Mott, Tsuyoshi Koide

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 25 citations in OpenAlex.

  1. Increased abundance of Limosilactobacillus reuteri in the gut of selectively bred high-tameness mice and its association with behavioural changes.DNA research : an international journal for rapid publication of reports on genes and genomes · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Mapping QTL associated with resistance toFrontiers in plant science · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Using Heterogeneous Stocks for Fine-Mapping Genetically Complex Traits.Methods in molecular biology (Clifton, N.J.) · 2019
    Review
  13. Measuring Active and Passive Tameness Separately in Mice.Journal of visualized experiments : JoVE · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Yuki MatsumotoMouse Genomics Resource Laboratory, National Institute of Genetics, Yata, Mishima, Shizuoka, 411-8540, Japan.
Tatsuhiko GotoMouse Genomics Resource Laboratory, National Institute of Genetics, Yata, Mishima, Shizuoka, 411-8540, Japan.
Jo NishinoGraduate School of Medicine, Nagoya University, Tsurumai-cho, Showa-ku, Nagoya, 466-8550, Japan.
Hirofumi NakaokaDivision of Human Genetics, National Institute of Genetics, Yata, Mishima, Shizuoka, 411-8540, Japan.
Akira TanaveMouse Genomics Resource Laboratory, National Institute of Genetics, Yata, Mishima, Shizuoka, 411-8540, Japan.
Toshiyuki Takano-ShimizuDrosophila Genetic Resource Center, Kyoto Institute of Technology, Kyoto, 616-8354, Japan.
Richard F MottGenetics Institute, University College London, Gower Street, London, WC1E 6BT, UK.ORCID 0000-0002-1022-9330
Tsuyoshi KoideMouse Genomics Resource Laboratory, National Institute of Genetics, Yata, Mishima, Shizuoka, 411-8540, Japan. tkoide@nig.ac.jp.ORCID 0000-0002-1055-9073
National Institute of Genetics · JPKyoto Institute of Technology · JPNagoya University · JPUniversity College London · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tameness is a major behavioral factor for domestication, and can be divided into two potential components: motivation to approach humans (active tameness) and reluctance to avoid humans (passive tameness). We identified genetic loci for active tameness through selective breeding, selection mapping, and association analysis. In previous work using laboratory and wild mouse strains, we found that laboratory strains were predominantly selected for passive tameness but not active tameness during their domestication. To identify genetic regions associated with active tameness, we applied selective breeding over 9 generations for contacting, a behavioural parameter strongly associated with active tameness. The prerequisite for successful selective breeding is high genetic variation in the target population, so we established and used a novel resource, wild-derived heterogeneous stock (WHS) mice from eight wild strains. The mice had genetic variations not present in other outbred mouse populations. Selective breeding of the WHS mice increased the contacting level through the generations. Selection mapping was applied to the selected population using a simulation based on a non-selection model and inferred haplotype data derived from single-nucleotide polymorphisms. We found a genomic signature for selection on chromosome 11 containing two closely linked loci.

Indexed as

Quantitative Trait LociAnimalsAnimals, DomesticBehavior, AnimalChromosome MappingChromosomes, MammalianGenetic VariationMicePhylogenyPolymorphism, Single NucleotideSelective Breeding

Identifiers

PMID28676693
PMCPMC5496859
OpenAlexW2727628348

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.