Evidence map›Paper›PMID 28675659›Full record

ArticleMicrobiologyOpen2017

Characterization of a Deinococcus radiodurans MazF: A UACA-specific RNA endoribonuclease.

Tatsuki Miyamoto, Yuri Ota, Akiko Yokota, Tetsushi Suyama, Satoshi Tsuneda, Naohiro Noda

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. MazEF Homologs inToxins · 2024
    Article
  3. Article
  4. Review
  5. Article
  6. Conserved Amino Acid Moieties ofFrontiers in microbiology · 2021
    Article
  7. Review
  8. Article
  9. Review
  10. Frontiers in microbiology · 2018
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Tatsuki MiyamotoDepartment of Life Science and Medical Bioscience, Waseda University, Tokyo, Japan.
Yuri OtaDepartment of Life Science and Medical Bioscience, Waseda University, Tokyo, Japan.
Akiko YokotaBiomedical Research Institute, National Institute of Advanced Industrial Science and Technology, Ibaraki, Japan.
Tetsushi SuyamaBiomedical Research Institute, National Institute of Advanced Industrial Science and Technology, Ibaraki, Japan.
Satoshi TsunedaDepartment of Life Science and Medical Bioscience, Waseda University, Tokyo, Japan.
Naohiro NodaDepartment of Life Science and Medical Bioscience, Waseda University, Tokyo, Japan.ORCID 0000-0001-7592-5495
Waseda University · JPNational Institute of Advanced Industrial Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbes are known to withstand environmental stresses by using chromosomal toxin-antitoxin systems. MazEF is one of the most extensively studied toxin-antitoxin systems. In stressful environments, MazF toxins modulate translation by cleaving single-stranded RNAs in a sequence-specific fashion. Previously, a chromosomal gene located at DR0417 in Deinococcus radiodurans was predicted to code for a MazF endoribonuclease (MazF

Indexed as

Binding SitesNucleotide MotifsAmino Acid SequenceDeinococcusDNA-Binding ProteinsEndoribonucleasesGene ExpressionPlasmidsRecombinant Fusion ProteinsRNARNA CleavageSubstrate SpecificityDNA-Binding ProteinsEndoribonucleasesRecombinant Fusion ProteinsRNADeinococcus radioduransMazEFsequence specificitytoxin-antitoxin system

Identifiers

PMID28675659
PMCPMC5635168
OpenAlexW2731950489

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.