Evidence map›Paper›PMID 28675601›Full record

ArticleJournal of cachexia, sarcopenia and muscle2017

Proteasomal activity-based probes mark protein homeostasis in muscles.

Vered Raz, Yotam Raz, Guillem Paniagua-Soriano, Jacomina Cornelia Roorda, Cyriel Olie, Muhammad Riaz, Bogdan I Florea

Open access · goldAbstract read
In one paragraph

Article in Journal of cachexia, sarcopenia and muscle, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Proteasomal activity-based probes mark protein homeostasis in muscles.Journal of cachexia, sarcopenia and muscle · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Vered RazDepartment of Human Genetics, LUMC, Leiden, The Netherlands.
Yotam RazDepartment of Human Genetics, LUMC, Leiden, The Netherlands.
Guillem Paniagua-SorianoBio-organic Synthesis, Leiden Institute of Chemistry, Leiden, The Netherlands.
Jacomina Cornelia RoordaDepartment of Human Genetics, LUMC, Leiden, The Netherlands.
Cyriel OlieDepartment of Human Genetics, LUMC, Leiden, The Netherlands.
Muhammad RiazDepartment of Human Genetics, LUMC, Leiden, The Netherlands.
Bogdan I FloreaBio-organic Synthesis, Leiden Institute of Chemistry, Leiden, The Netherlands.
Centre for Human Drug Research · NLLeiden University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundProtein homeostasis, primarily regulated by the ubiquitin-proteasome system is crucial for proper function of cells. In tissues of post-mitotic cells, the impaired ubiquitin-proteasome system is found in a wide range of neuromuscular disorders. Activity-based probes (ABPs) measure proteasomal proteolytic subunits and can be used to report protein homeostasis. Despite the crucial role of the proteasome in neuromuscular pathologies, ABPs were not employed in muscle cells and tissues, and measurement of proteasomal activity was carried out in vitro using low-throughput procedures.

methodsWe screened six ABPs for specific application in muscle cell culture using high throughput call-based imaging procedures. We then determined an in situ proteasomal activity in myofibers of muscle cryosections.

resultsWe demonstrate that LWA300, a pan-reactive proteasomal probe, is most suitable to report proteasomal activity in muscle cells using cell-based bio-imaging. We found that proteasomal activity is two-fold and three-fold enhanced in fused muscle cell culture compared with non-fused cells. Moreover, we found that proteasomal activity can discriminate between muscles. Across muscles, a relative higher proteasomal activity was found in hybrid myofibers whereas fast-twitch myofibers displayed lower activity.

conclusionsOur study demonstrates that proteasomal activity differ between muscles and between myofiber types. We suggest that ABPs can be used to report disease progression and treatment efficacy.

Indexed as

ProteostasisAnimalsCell LineCells, CulturedMaleMiceMolecular ImagingMolecular ProbesMuscle ProteinsMuscle, SkeletalMyoblastsProteasome Endopeptidase ComplexMolecular ProbesMuscle ProteinsProteasome Endopeptidase ComplexActivity probesCell-based imagingCellomicsFlow cytometryProteasomal activity

Identifiers

PMID28675601
PMCPMC5659047
OpenAlexW2727973394

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.