Evidence map›Paper›PMID 28675441›Full record

ArticleThe New phytologist2018

Two proteases with caspase-3-like activity, cathepsin B and proteasome, antagonistically control ER-stress-induced programmed cell death in Arabidopsis.

Yao-Min Cai, Jia Yu, Yuan Ge, Aleksandr Mironov, Patrick Gallois

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 65 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. CRISPR-Cas9-mediated editing ofGM crops & food · 2025
    Article
  6. Review
  7. γ-Aminobutyric Acid Alleviates Programmed Cell Death in TwoInternational journal of molecular sciences · 2024
    Article
  8. Integrated Biological Experiments and Proteomic Analyses ofInternational journal of molecular sciences · 2024
    Article
  9. Article
  10. Article
  11. Plant cathepsin B, a versatile protease.Frontiers in plant science · 2024
    Review
  12. Article
  13. Vacuolar Processing Enzymes in Plant Programmed Cell Death and Autophagy.International journal of molecular sciences · 2023
    Review
  14. Article
  15. A Pipeline to Monitor Proteasome Homeostasis in Plants.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  16. A Novel Senescence-Specific Gene (International journal of molecular sciences · 2022
    Article
  17. Article
  18. Article
  19. How Cysteine Protease GeneInternational journal of molecular sciences · 2021
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Yao-Min CaiSchool of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Michael Smith Building, Oxford Road, Manchester, M13 9PT, UK.
Jia YuSchool of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Michael Smith Building, Oxford Road, Manchester, M13 9PT, UK.
Yuan GeCollege of Marine Life Science, Ocean University of China, No. 5 Yushan Road, Qingdao, 266003, China.
Aleksandr MironovEM Core Facility, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Michael Smith Building, Oxford Road, Manchester, M13 9PT, UK.
Patrick GalloisSchool of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Michael Smith Building, Oxford Road, Manchester, M13 9PT, UK.
University of Manchester · GBOcean University of China · CN

Funding

Biotechnology and Biological Sciences Research CouncilWellcome Trust
6 · The paper itself

Abstract

Programmed cell death (PCD) induced by endoplasmic reticulum (ER) stress is implicated in various plant physiological processes, yet its mechanism is still elusive. An activation of caspase-3-like enzymatic activity was clearly demonstrated but the role of the two known plant proteases with caspase-3-like activity, cathepsin B and proteasome subunit PBA1, remains to be established. Both genetic downregulation and chemical inhibition were used to investigate the function of cathepsin B and PBA1 in ER-stress-induced PCD (ERSID). Transcript level and activity labelling of cathepsin B were used to assess activation. To study tonoplast rupture, a plant PCD feature, both confocal and electronic microscopies were used. Cathepsin B downregulation reduced reactive oxygen species (ROS) accumulation and ERSID without affecting the induction of the unfolded protein response (UPR), but downregulation of PBA1 increased UPR and ERSID. Tonoplast rupture was not altered in the cathepsin B mutant and cathepsin B activation was independent of vacuolar processing enzyme (VPE). VPE activity was independent of cathepsin B. ERSID is regulated positively by cathepsin B and negatively by PBA1, revealing a complex picture behind caspase-3-like activity in plants. Cathepsin B may execute its function after tonoplast rupture and works in parallel with VPE.

Indexed as

ApoptosisEndoplasmic Reticulum StressArabidopsisArabidopsis ProteinsCaspase 3Cathepsin BCysteine EndopeptidasesDown-RegulationPhenotypeProteasome Endopeptidase ComplexSeedlingsUnfolded Protein ResponseVacuolesArabidopsis ProteinsAT4G31300 protein, ArabidopsisCaspase 3Cathepsin Bcathepsin B, ArabidopsisCysteine EndopeptidasesProteasome Endopeptidase Complexendoplasmic reticulum (ER)-stressER-stress-induced death (ERSID)plant proteaseproteasome subunit PBA1tunicamycinunfolded protein response (UPR)vacuolar processing enzyme (VPE)vacuole

Identifiers

PMID28675441
PMCPMC5947621
OpenAlexW2619874134

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.