Evidence map›Paper›PMID 28674006›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Clusters of calcium release channels harness the Ising phase transition to confine their elementary intracellular signals.

Anna V Maltsev, Victor A Maltsev, Michael D Stern

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Simulating cardiac CaPflugers Archiv : European journal of physiology · 2021
    Article
  9. Recruiting RyRs to Open in a CaBiophysical journal · 2020
    Article
  10. Article
  11. New Insights in Cardiac Calcium Handling and Excitation-Contraction Coupling.Advances in experimental medicine and biology · 2018
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anna V MaltsevDepartment of Mathematics, University of Bristol, Bristol BS8 1TH, United Kingdom.
Victor A MaltsevLaboratory of Cardiovascular Science, National Institute on Aging, NIH, Baltimore, MD 21224.
Michael D SternLaboratory of Cardiovascular Science, National Institute on Aging, NIH, Baltimore, MD 21224 SternMi@mail.nih.gov.ORCID 0000-0003-4476-7425

Funding

Stochastic Simulation Of Excitation-contraction CouplingZIAAG000844 · NIA · NATIONAL INSTITUTE ON AGING · PI STERN, MICHAEL · 2009 to 2025
$8.7M
6 · The paper itself

Abstract

Intracellular Ca signals represent a universal mechanism of cell function. Messages carried by Ca are local, rapid, and powerful enough to be delivered over the thermal noise. A higher signal-to-noise ratio is achieved by a cooperative action of Ca release channels such as IP3 receptors or ryanodine receptors arranged in clusters (release units) containing a few to several hundred release channels. The channels synchronize their openings via Ca-induced Ca release, generating high-amplitude local Ca signals known as puffs in neurons and sparks in muscle cells. Despite the positive feedback nature of the activation, Ca signals are strictly confined in time and space by an unexplained termination mechanism. Here we show that the collective transition of release channels from an open to a closed state is identical to the phase transition associated with the reversal of magnetic field in an Ising ferromagnet. Our simple quantitative criterion closely predicts the Ca store depletion level required for spark termination for each cluster size. We further formulate exact requirements that a cluster of release channels should satisfy in any cell type for our mapping to the Ising model and the associated formula to remain valid. Thus, we describe deterministically the behavior of a system on a coarser scale (release unit) that is random on a finer scale (release channels), bridging the gap between scales. Our results provide exact mapping of a nanoscale biological signaling model to an interacting particle system in statistical physics, making the extensive mathematical apparatus available to quantitative biology.

Indexed as

Calcium SignalingAnimalsCalciumCalcium ChannelsCytoplasmHeartHot TemperatureLipid BilayersMagnetic FieldsModels, BiologicalModels, StatisticalRyanodine Receptor Calcium Release ChannelSarcoplasmic ReticulumSignal-To-Noise RatioCalciumCalcium ChannelsLipid BilayersRyanodine Receptor Calcium Release Channelcalciumcalcium sparkexcitation–contraction couplingheartryanodine receptor

Identifiers

PMID28674006
PMCPMC5530665

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.